Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 ASAP1-IT2-201ENST00000626977 2031 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 IL1A-201ENST00000263339 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 CSHL1-202ENST00000309894 669 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 MCTS1-201ENST00000371315 1130 ntTSL 2 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 SNORA77.1-201ENST00000408156 125 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 RPSAP63-201ENST00000412013 888 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AL136528.2-201ENST00000416554 351 ntTSL 2 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 TIMM8AP1-201ENST00000419283 295 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 TRAPPC2P5-201ENST00000426293 308 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AC018641.1-201ENST00000435950 796 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 CEACAMP9-201ENST00000442990 513 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 FGF14-AS1-201ENST00000444686 294 ntTSL 3 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 VDAC2P4-201ENST00000452925 711 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AP000893.1-201ENST00000474462 794 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AC099340.1-201ENST00000475247 599 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 TMEM251P1-201ENST00000503717 318 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 LINC02221-201ENST00000508097 499 ntTSL 3 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 Y_RNA.702-201ENST00000516843 96 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 IGLV1-41-201ENST00000519790 406 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AC084116.1-201ENST00000521428 489 ntTSL 3 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AP001646.1-201ENST00000527936 915 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AP001124.1-201ENST00000529628 385 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AL121594.2-201ENST00000541658 472 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 NPM1P42-201ENST00000560329 862 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AC032019.1-201ENST00000579100 173 ntTSL 3 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AC009831.3-201ENST00000582538 586 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 CLEC4M-206ENST00000595496 792 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 LINC00969-229ENST00000596584 863 ntTSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 SQSTM1P1-201ENST00000603451 859 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AL357137.1-201ENST00000604645 203 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AC002553.4-201ENST00000616896 331 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 AC024257.4-201ENST00000618746 458 ntBASIC10.08□□□□□ -0.8
RTN4Q9NQC3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 NDUFB4-203ENST00000485064 1426 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 PAK5-202ENST00000378423 4613 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 PEX2-204ENST00000520103 1470 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 OR51G2-201ENST00000322013 1023 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 RNASE1-203ENST00000397970 769 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AL031777.1-201ENST00000405418 499 ntBASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AC017035.1-201ENST00000411999 1115 ntBASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AC010731.1-201ENST00000426087 846 ntBASIC10.07□□□□□ -0.8
RTN4Q9NQC3 RPS27AP6-201ENST00000427962 448 ntBASIC10.07□□□□□ -0.8
RTN4Q9NQC3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AC009961.2-201ENST00000435771 251 ntBASIC10.07□□□□□ -0.8
RTN4Q9NQC3 LDHAP2-201ENST00000437325 985 ntBASIC10.07□□□□□ -0.8
RTN4Q9NQC3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AL596087.2-201ENST00000451784 484 ntTSL 3 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 TMED10P2-201ENST00000474255 612 ntBASIC10.07□□□□□ -0.8
RTN4Q9NQC3 LINC02006-203ENST00000493214 812 ntTSL 2 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AC090453.1-201ENST00000495560 436 ntBASIC10.07□□□□□ -0.8
RTN4Q9NQC3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC10.07□□□□□ -0.8
RTN4Q9NQC3 ARL2BPP6-201ENST00000512757 439 ntBASIC10.07□□□□□ -0.8
RTN4Q9NQC3 COX6CP8-201ENST00000522620 226 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms