Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AL669831.5-218ENST00000591702 1873 ntBASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 RPS26P39-201ENST00000469206 341 ntBASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC110056.1-201ENST00000525759 911 ntBASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC090424.1-201ENST00000535243 736 ntBASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC007956.1-201ENST00000555623 542 ntBASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 MIR6886-201ENST00000619864 61 ntBASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC103703.1-201ENST00000634783 663 ntBASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AC009135.2-201ENST00000624136 1768 ntBASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.4□□□□□ -1.54
KIAA1549Q9HCM3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 RN7SKP292-201ENST00000365522 317 ntBASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 AL096829.1-201ENST00000413677 457 ntBASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 CDY17P-201ENST00000414121 1282 ntBASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 AC104843.2-201ENST00000427666 297 ntBASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 RPL7L1P3-201ENST00000455249 689 ntBASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 AL356801.1-201ENST00000559320 294 ntBASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 AC026124.2-201ENST00000621847 656 ntBASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KIAA1549Q9HCM3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AC023490.2-201ENST00000359859 470 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 MYL6P5-201ENST00000412707 459 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AL445466.1-201ENST00000448432 357 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 RPS23P6-201ENST00000466136 431 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AC011411.1-201ENST00000509592 876 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AC010343.2-201ENST00000510162 224 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 CYP4F27P-201ENST00000514557 494 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AL683813.2-201ENST00000605245 502 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 DOCK11P1-201ENST00000553480 5932 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 RNF19BPY-201ENST00000458209 1550 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms