Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 LSM3P3-201ENST00000436601 306 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 HMGN1P6-201ENST00000438508 291 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 FUNDC2P2-202ENST00000443452 493 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 MTND2P22-201ENST00000444325 1033 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 Z83846.1-201ENST00000446798 265 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC092685.1-201ENST00000447960 1243 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 MRPL35P2-201ENST00000448009 511 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 TREML3P-201ENST00000457327 501 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC002075.1-201ENST00000457396 676 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC004263.1-201ENST00000479327 332 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC095052.1-201ENST00000509955 863 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 MRPS36P3-201ENST00000519284 130 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC068305.2-201ENST00000550567 1205 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 MTND4P33-201ENST00000556706 766 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AL035411.2-201ENST00000604022 421 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC025588.2-201ENST00000604851 466 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC012510.1-201ENST00000607946 759 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AP003108.4-201ENST00000623917 878 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC093909.6-201ENST00000624757 775 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 ZNF733P-202ENST00000444809 1573 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC012321.1-201ENST00000561622 1588 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 HSPD1P1-201ENST00000503199 1726 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 AL133268.1-201ENST00000405676 1401 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 RNA5SP27-201ENST00000363839 119 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 RNA5SP396-201ENST00000364834 120 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 RNU4-31P-201ENST00000384211 141 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 SNORD65C-201ENST00000390962 71 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC119751.3-201ENST00000399720 670 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC073052.1-201ENST00000440417 714 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 PA2G4P1-201ENST00000442248 1197 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AL157777.1-201ENST00000468100 304 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 CBX5P1-201ENST00000468470 561 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 RN7SL160P-201ENST00000468558 284 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AP000563.1-201ENST00000490865 758 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC027369.2-201ENST00000528030 440 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 OR7E96P-201ENST00000530816 976 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 OR4C1P-201ENST00000530880 937 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC068631.3-201ENST00000538831 225 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC091515.1-201ENST00000548110 679 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 UBE2CP4-201ENST00000561405 535 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC023827.2-201ENST00000566880 1061 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC027796.1-201ENST00000575593 512 ntBASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM55Q9BYV6 MIR8082-201ENST00000612488 81 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms