Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 NDUFB5P1-201ENST00000508134 564 ntBASIC9.05□□□□□ -0.96
SCAPERQ9BY12 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC9.05□□□□□ -0.96
SCAPERQ9BY12 IGBP1P1-201ENST00000554337 1009 ntBASIC9.05□□□□□ -0.96
SCAPERQ9BY12 AL049872.1-201ENST00000556323 322 ntBASIC9.05□□□□□ -0.96
SCAPERQ9BY12 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC9.05□□□□□ -0.96
SCAPERQ9BY12 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SCAPERQ9BY12 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC9.05□□□□□ -0.96
SCAPERQ9BY12 AL445649.1-201ENST00000615941 691 ntBASIC9.05□□□□□ -0.96
SCAPERQ9BY12 AL136531.3-201ENST00000624378 3658 ntBASIC9.05□□□□□ -0.96
SCAPERQ9BY12 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 AC025470.1-201ENST00000510053 2032 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 MRRFP1-201ENST00000435941 1675 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 RN7SKP29-201ENST00000410957 272 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 H2AFZP6-201ENST00000444403 394 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 EEF1B2P5-201ENST00000444820 548 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 AC083795.1-201ENST00000491760 320 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 HMGB1P42-201ENST00000532126 553 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 AC073916.1-201ENST00000545095 130 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 AC013731.1-201ENST00000604340 883 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 CCL14-204ENST00000622526 472 ntTSL 3 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 AC007683.2-201ENST00000624681 714 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 HDAC1P2-201ENST00000453661 1398 ntBASIC9.04□□□□□ -0.96
SCAPERQ9BY12 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.04□□□□□ -0.96
SCAPERQ9BY12 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AC136624.1-201ENST00000400791 413 ntBASIC9.03□□□□□ -0.96
SCAPERQ9BY12 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 HIGD1AP14-201ENST00000507617 282 ntBASIC9.03□□□□□ -0.96
SCAPERQ9BY12 RNA5SP400-201ENST00000517155 111 ntBASIC9.03□□□□□ -0.96
SCAPERQ9BY12 OR6M2P-201ENST00000529831 871 ntBASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AC097467.4-201ENST00000605504 141 ntBASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AC008115.4-201ENST00000619780 775 ntBASIC9.03□□□□□ -0.96
SCAPERQ9BY12 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 CASC19-264ENST00000641912 1184 ntBASIC9.03□□□□□ -0.96
SCAPERQ9BY12 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC9.03□□□□□ -0.96
SCAPERQ9BY12 AL592429.1-201ENST00000403909 1473 ntBASIC9.03□□□□□ -0.96
SCAPERQ9BY12 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
SCAPERQ9BY12 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SCAPERQ9BY12 AC092821.3-202ENST00000641304 2767 ntBASIC9.02□□□□□ -0.96
SCAPERQ9BY12 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 OR10R3P-201ENST00000361688 942 ntBASIC9.02□□□□□ -0.97
SCAPERQ9BY12 RNA5SP350-201ENST00000363298 111 ntBASIC9.02□□□□□ -0.97
SCAPERQ9BY12 RNU1-24P-201ENST00000364285 165 ntBASIC9.02□□□□□ -0.97
SCAPERQ9BY12 RPL35AP24-201ENST00000413846 330 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms