Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP2Q96SN8 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP2Q96SN8 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP2Q96SN8 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP2Q96SN8 AL139805.2-201ENST00000455305 2433 ntBASIC6.99□□□□□ -1.29
CDK5RAP2Q96SN8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP2Q96SN8 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP2Q96SN8 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 OR9K1P-201ENST00000326513 941 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 RNU6-171P-201ENST00000384354 107 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AC079355.1-201ENST00000421770 223 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AC011225.1-201ENST00000457751 369 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AL445687.2-201ENST00000458156 728 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 ACA64.4-201ENST00000459070 127 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 RNA5SP394-201ENST00000364216 119 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 MIR130A-201ENST00000385274 89 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 RNA5SP178-201ENST00000410380 128 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 OR6E1P-201ENST00000414424 923 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AC006335.2-201ENST00000437993 330 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 RPS7P3-201ENST00000443360 580 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 OR7E116P-201ENST00000448529 957 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 RAB28P2-201ENST00000454299 641 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AC096754.1-201ENST00000508904 818 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 GARSP1-201ENST00000570895 719 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 MIR4776-2-201ENST00000580204 80 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 AC018659.2-201ENST00000624690 715 ntBASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP2Q96SN8 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 AC007842.1-201ENST00000597336 2039 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 RN7SKP124-201ENST00000364730 341 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 GABARAPL3-201ENST00000412799 354 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 HMGA1P8-201ENST00000414130 321 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 AL022331.1-201ENST00000429025 477 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 NPM1P19-201ENST00000450070 712 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 AC138866.2-201ENST00000508650 584 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 AC027308.1-201ENST00000517993 110 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 SNORD95-201ENST00000579879 68 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 RN7SL787P-201ENST00000613000 284 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 CU639417.4-201ENST00000623928 207 ntBASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP2Q96SN8 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CDK5RAP2Q96SN8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms