Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL21A1Q96P44 WDR95P-201ENST00000425638 1542 ntBASIC5.79□□□□□ -1.48
COL21A1Q96P44 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 BX284613.1-201ENST00000452221 1641 ntBASIC5.78□□□□□ -1.48
COL21A1Q96P44 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 AL096800.1-201ENST00000405326 893 ntBASIC5.78□□□□□ -1.48
COL21A1Q96P44 RNA5SP198-201ENST00000410376 127 ntBASIC5.78□□□□□ -1.48
COL21A1Q96P44 AC015977.1-201ENST00000418887 292 ntBASIC5.78□□□□□ -1.48
COL21A1Q96P44 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 AC005165.2-201ENST00000466070 380 ntBASIC5.78□□□□□ -1.48
COL21A1Q96P44 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 AC092865.1-201ENST00000544395 1023 ntBASIC5.78□□□□□ -1.48
COL21A1Q96P44 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 AP001157.1-201ENST00000550837 2339 ntBASIC5.78□□□□□ -1.48
COL21A1Q96P44 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 AC010998.3-201ENST00000613871 631 ntBASIC5.78□□□□□ -1.48
COL21A1Q96P44 AC009120.7-201ENST00000623452 780 ntBASIC5.78□□□□□ -1.48
COL21A1Q96P44 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COL21A1Q96P44 AL591135.1-201ENST00000401578 5914 ntBASIC5.78□□□□□ -1.48
COL21A1Q96P44 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL21A1Q96P44 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 AC022164.1-201ENST00000568767 2673 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 RNA5SP346-201ENST00000363541 121 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 SNORA43.1-201ENST00000364863 140 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 MIR188-201ENST00000385034 86 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 AL121977.1-201ENST00000401636 979 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 RN7SKP121-201ENST00000410842 305 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 RN7SKP144-201ENST00000411108 279 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 AL590399.2-201ENST00000427536 309 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 IGLV3-4-201ENST00000432300 244 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 AL133351.3-201ENST00000454998 193 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 OR7E22P-201ENST00000478335 1035 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 RN7SL362P-201ENST00000494228 267 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 SNX18P25-201ENST00000510539 758 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 AC020916.2-201ENST00000591242 360 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 DYNLL1P1-201ENST00000595442 269 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 AL135999.3-201ENST00000610501 812 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 OR7A1P-202ENST00000641542 1158 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 AC114876.1-201ENST00000490962 1366 ntBASIC5.77□□□□□ -1.49
COL21A1Q96P44 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL21A1Q96P44 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL21A1Q96P44 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
COL21A1Q96P44 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL21A1Q96P44 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.76□□□□□ -1.49
COL21A1Q96P44 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL21A1Q96P44 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL21A1Q96P44 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL21A1Q96P44 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL21A1Q96P44 AC090181.3-201ENST00000624777 1514 ntBASIC5.76□□□□□ -1.49
COL21A1Q96P44 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL21A1Q96P44 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms