Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-615P-201ENST00000516065 106 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNED1Q8TER0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 AC244517.3-201ENST00000616254 1235 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 AC022726.2-201ENST00000634673 547 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNED1Q8TER0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNED1Q8TER0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 AC011369.2-201ENST00000624423 1567 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 LINC02019-201ENST00000608605 2060 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNED1Q8TER0 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNED1Q8TER0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.27□□□□□ -1.24
SNED1Q8TER0 SNORA70-201ENST00000384436 135 ntBASIC7.27□□□□□ -1.24
SNED1Q8TER0 OR6E1P-201ENST00000414424 923 ntBASIC7.27□□□□□ -1.24
SNED1Q8TER0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.27□□□□□ -1.24
SNED1Q8TER0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.27□□□□□ -1.24
SNED1Q8TER0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
SNED1Q8TER0 AC073594.1-201ENST00000462065 364 ntBASIC7.27□□□□□ -1.24
SNED1Q8TER0 RPS3AP15-201ENST00000483874 781 ntBASIC7.27□□□□□ -1.24
SNED1Q8TER0 NDUFA5P12-201ENST00000503796 343 ntBASIC7.27□□□□□ -1.24
SNED1Q8TER0 MRPS16P1-201ENST00000523462 412 ntBASIC7.27□□□□□ -1.24
SNED1Q8TER0 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.27□□□□□ -1.24
SNED1Q8TER0 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.27□□□□□ -1.24
SNED1Q8TER0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.27□□□□□ -1.24
SNED1Q8TER0 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.27□□□□□ -1.24
SNED1Q8TER0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.27□□□□□ -1.24
SNED1Q8TER0 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
SNED1Q8TER0 FAM27E4-201ENST00000605259 342 ntBASIC7.27□□□□□ -1.24
SNED1Q8TER0 AL359513.1-201ENST00000614364 557 ntBASIC7.27□□□□□ -1.24
SNED1Q8TER0 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.24
SNED1Q8TER0 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
SNED1Q8TER0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNED1Q8TER0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNED1Q8TER0 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNED1Q8TER0 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 AC123769.2-201ENST00000624332 5984 ntBASIC7.27□□□□□ -1.25
SNED1Q8TER0 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 AC007842.1-201ENST00000597336 2039 ntBASIC7.27□□□□□ -1.25
SNED1Q8TER0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNED1Q8TER0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNED1Q8TER0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNED1Q8TER0 FAM32BP-201ENST00000344033 333 ntBASIC7.27□□□□□ -1.25
SNED1Q8TER0 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 RPL35AP19-201ENST00000469425 329 ntBASIC7.27□□□□□ -1.25
SNED1Q8TER0 AC004815.1-201ENST00000484185 331 ntBASIC7.27□□□□□ -1.25
SNED1Q8TER0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 OR10G5P-201ENST00000532733 358 ntBASIC7.27□□□□□ -1.25
SNED1Q8TER0 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SNED1Q8TER0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 SAMMSON-227ENST00000642114 1199 ntBASIC7.27□□□□□ -1.25
SNED1Q8TER0 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SNED1Q8TER0 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNED1Q8TER0 AC110716.2-201ENST00000563865 3945 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNED1Q8TER0 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNED1Q8TER0 AC073429.2-201ENST00000569694 1444 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNED1Q8TER0 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 FO393409.1-201ENST00000399325 1372 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNED1Q8TER0 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 RN7SKP59-201ENST00000410520 314 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 GABARAPL3-201ENST00000412799 354 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 AL022331.1-201ENST00000429025 477 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNED1Q8TER0 RPS12P17-201ENST00000438591 377 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 RN7SL610P-201ENST00000463845 291 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 RNA5SP400-201ENST00000517155 111 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 IGLV2-28-201ENST00000520681 304 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 OR56A7P-201ENST00000524865 941 ntBASIC7.26□□□□□ -1.25
SNED1Q8TER0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNED1Q8TER0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.26□□□□□ -1.25
SNED1Q8TER0 AC092944.2-201ENST00000605443 889 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms