Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MRPS16P1-201ENST00000523462 412 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC114786.1-201ENST00000512892 1415 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC092070.2-203ENST00000598377 3644 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 AP000547.3-204ENST00000588548 2523 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 RN7SL346P-201ENST00000491561 294 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 OR6M2P-201ENST00000529831 871 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 RBM22P1-201ENST00000578589 1214 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC009237.1-201ENST00000442127 744 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AL035090.1-201ENST00000454835 332 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC104164.1-201ENST00000460282 590 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 RPL7P39-201ENST00000481157 744 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 RN7SL30P-201ENST00000488416 306 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC087783.2-201ENST00000605070 562 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC137056.2-201ENST00000624055 1958 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC022905.1-201ENST00000503430 3048 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AL663074.2-201ENST00000440621 479 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC009220.1-201ENST00000451614 275 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 RNA5SP211-201ENST00000365516 117 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 RPL7L1P9-201ENST00000431298 745 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 RPS3AP53-201ENST00000454716 778 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 RPL15P21-201ENST00000495592 567 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 GARSP1-201ENST00000570895 719 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 MIR7703-201ENST00000620784 77 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC091953.3-201ENST00000623220 236 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms