Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC027559.1-201ENST00000636288 271 ntBASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 AC140479.4-205ENST00000636339 820 ntBASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 AC068137.4-201ENST00000638485 296 ntBASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 AC013437.2-201ENST00000639587 677 ntBASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 AC067942.1-201ENST00000488045 1493 ntBASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
SIMC1Q8NDZ2 AC011504.1-201ENST00000623331 4103 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC012321.1-201ENST00000561622 1588 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 ZNF806-201ENST00000438300 1774 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 MAPK10-287ENST00000641217 3037 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 SNORA63.3-201ENST00000362682 132 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 RN7SKP189-201ENST00000365042 330 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AL590635.1-201ENST00000406314 586 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 RN7SKP91-201ENST00000410852 288 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 UBTFL2-201ENST00000411859 1191 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC092634.2-201ENST00000428146 1010 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 PUDPP2-201ENST00000431423 643 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 RN7SL654P-201ENST00000479178 292 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 RN7SL382P-201ENST00000482631 282 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 RN7SL561P-201ENST00000488553 281 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC027338.1-201ENST00000514840 825 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 IGKV2-4-201ENST00000523070 340 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 OR10D4P-201ENST00000525892 951 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AP002004.1-206ENST00000532441 876 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC024405.1-201ENST00000532521 1042 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AL049838.1-201ENST00000563647 981 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 RN7SL32P-201ENST00000580514 281 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 RN7SL66P-201ENST00000582099 264 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 MIR4310-201ENST00000582950 57 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC067838.1-201ENST00000606064 577 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC009464.1-201ENST00000615731 469 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC068787.1-201ENST00000623908 691 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC019226.2-201ENST00000625973 424 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AL596275.2-207ENST00000641188 675 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AL354702.2-202ENST00000641481 890 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 AC068769.1-201ENST00000474767 2426 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 OLMALINC-203ENST00000641087 3779 ntBASIC6.31□□□□□ -1.4
SIMC1Q8NDZ2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms