Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 RPL12P12-201ENST00000424633 501 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AC016027.4-201ENST00000450866 277 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AC023194.2-201ENST00000465398 406 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 USP9YP2-201ENST00000504503 1000 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 USP9YP1-201ENST00000513521 1002 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AC016252.1-201ENST00000609721 474 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AC096861.1-201ENST00000616652 240 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AL357562.1-201ENST00000624911 609 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 AC007114.2-201ENST00000576014 4281 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 OOSP1-201ENST00000398992 1270 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 RN7SKP151-201ENST00000410230 316 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 ATP5LP2-201ENST00000440646 311 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 TRIM60P16-201ENST00000444048 694 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 RPL23AP60-201ENST00000450011 454 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 RAB28P2-201ENST00000454299 641 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 PFN1P8-201ENST00000497012 543 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 LSM3P4-201ENST00000502948 309 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 RN7SKP67-201ENST00000515905 235 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 RNA5SP340-201ENST00000517132 107 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 AP005119.1-201ENST00000580956 292 ntBASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
C9orf40Q8IXQ3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 RN7SKP275-201ENST00000364626 301 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC004386.1-201ENST00000393214 761 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 PTCD2P2-201ENST00000415579 1095 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AKR1B10P1-201ENST00000425765 942 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms