Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC110926.1-201ENST00000412499 2825 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC110998.1-201ENST00000519029 2053 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 RNY4P24-201ENST00000362735 96 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 Y_RNA.390-201ENST00000383932 102 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 RPS27AP11-201ENST00000402798 447 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC004448.2-201ENST00000422360 586 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 MTCO1P3-201ENST00000429327 192 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC099344.1-201ENST00000433548 492 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AL604028.2-201ENST00000437848 788 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 UBQLN1P1-207ENST00000441056 1169 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 CBX5P1-201ENST00000468470 561 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AL928654.1-201ENST00000476081 354 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 OR5H5P-201ENST00000503164 928 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 MRPL57P6-201ENST00000506570 309 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 RNU6-1334P-201ENST00000516032 105 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC130366.1-201ENST00000526505 1192 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 MED28P5-201ENST00000528254 438 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 MIR3137-201ENST00000577367 75 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC103881.1-201ENST00000603476 538 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC119501.1-201ENST00000603646 475 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 MARK3P1-201ENST00000604796 643 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AL157359.3-201ENST00000623771 217 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC006453.3-201ENST00000635891 377 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AC087565.3-203ENST00000641018 837 ntBASIC8.17□□□□□ -1.1
RNF135Q8IUD6 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF135Q8IUD6 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 RNU6-707P-201ENST00000364647 95 ntBASIC8.16□□□□□ -1.1
RNF135Q8IUD6 FAM204BP-201ENST00000369171 701 ntBASIC8.16□□□□□ -1.1
RNF135Q8IUD6 OR1L1-202ENST00000373686 1083 ntBASIC8.16□□□□□ -1.1
RNF135Q8IUD6 Y_RNA.408-201ENST00000383987 102 ntBASIC8.16□□□□□ -1.1
RNF135Q8IUD6 RNY3P10-201ENST00000384764 102 ntBASIC8.16□□□□□ -1.1
RNF135Q8IUD6 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 MTCO3P31-201ENST00000405526 789 ntBASIC8.16□□□□□ -1.1
RNF135Q8IUD6 MIR1272-201ENST00000408106 129 ntBASIC8.16□□□□□ -1.1
RNF135Q8IUD6 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 GAPDHP32-201ENST00000433816 998 ntBASIC8.16□□□□□ -1.1
RNF135Q8IUD6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC8.16□□□□□ -1.1
RNF135Q8IUD6 LSM3P3-201ENST00000436601 306 ntBASIC8.16□□□□□ -1.1
RNF135Q8IUD6 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms