Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 API5P1-201ENST00000424316 1510 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 RN7SKP254-201ENST00000410685 310 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC068138.1-201ENST00000412635 217 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 ATG4AP1-201ENST00000416893 538 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC004074.1-201ENST00000421810 1063 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AL139184.1-202ENST00000422303 222 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 DEFB130D-201ENST00000426866 237 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 RPL12P11-201ENST00000439970 501 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC092601.1-201ENST00000444526 383 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 TIMM8BP2-201ENST00000445940 251 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AL020997.1-201ENST00000446554 349 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC015524.1-201ENST00000491585 472 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 RPL37P23-201ENST00000492641 294 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC026414.1-201ENST00000504046 698 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 B4GALNT2P1-201ENST00000508857 307 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 OR5H4P-201ENST00000510851 923 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 NPM1P6-201ENST00000521088 871 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC134669.1-201ENST00000581275 672 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 FAM60CP-201ENST00000591086 664 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC009237.13-201ENST00000603193 276 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC079880.2-201ENST00000603790 1213 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC069545.1-201ENST00000605671 358 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC013476.2-201ENST00000614456 459 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC130456.6-201ENST00000623745 765 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 AC217777.1-201ENST00000570034 1471 ntBASIC9.06□□□□□ -0.96
RC3H1Q5TC82 ERG-205ENST00000398910 4954 ntTSL 5 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
RC3H1Q5TC82 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AP005139.1-201ENST00000580702 1647 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 ZNF833P-201ENST00000424938 1494 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 ZBTB8OSP1-201ENST00000342688 498 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 SNORA72.1-201ENST00000363485 129 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 Y_RNA.359-201ENST00000365498 102 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 MIR421-201ENST00000365696 85 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 CNN3P1-201ENST00000401596 935 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AL359715.1-201ENST00000404330 555 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AL590084.1-201ENST00000407885 387 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 UBTFL2-201ENST00000411859 1191 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 Z68694.1-201ENST00000413929 841 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AC000089.1-201ENST00000424559 801 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 MYL6P3-201ENST00000436904 432 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 PSPC1P2-201ENST00000455130 225 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 RN7SL180P-201ENST00000466769 294 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 ST13P6-201ENST00000522430 1102 ntBASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms