Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RN7SL836P-201ENST00000476140 296 ntBASIC6.71□□□□□ -1.34
TPM4P67936 GLUD1P3-202ENST00000508551 200 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.71□□□□□ -1.34
TPM4P67936 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TPM4P67936 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
TPM4P67936 OR56A7P-201ENST00000524865 941 ntBASIC6.71□□□□□ -1.34
TPM4P67936 CYCSP25-201ENST00000525280 316 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AC130366.1-201ENST00000526505 1192 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AP002004.1-206ENST00000532441 876 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.71□□□□□ -1.34
TPM4P67936 CHEK2P2-201ENST00000554701 672 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AL031429.2-201ENST00000602605 649 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.71□□□□□ -1.34
TPM4P67936 AL591167.1-201ENST00000607321 456 ntBASIC6.71□□□□□ -1.34
TPM4P67936 MIR8082-201ENST00000612488 81 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.71□□□□□ -1.34
TPM4P67936 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TPM4P67936 AC117503.3-201ENST00000623811 601 ntBASIC6.71□□□□□ -1.34
TPM4P67936 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.71□□□□□ -1.34
TPM4P67936 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.71□□□□□ -1.34
TPM4P67936 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.71□□□□□ -1.34
TPM4P67936 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TPM4P67936 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.71□□□□□ -1.34
TPM4P67936 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
TPM4P67936 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TPM4P67936 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TPM4P67936 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.7□□□□□ -1.34
TPM4P67936 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM4P67936 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.7□□□□□ -1.34
TPM4P67936 AC011416.1-201ENST00000514947 1732 ntBASIC6.7□□□□□ -1.34
TPM4P67936 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM4P67936 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
TPM4P67936 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 OR10R3P-201ENST00000361688 942 ntBASIC6.7□□□□□ -1.34
TPM4P67936 RNA5SP346-201ENST00000363541 121 ntBASIC6.7□□□□□ -1.34
TPM4P67936 U3.10-201ENST00000364459 214 ntBASIC6.7□□□□□ -1.34
TPM4P67936 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 BX276092.6-201ENST00000430476 250 ntBASIC6.7□□□□□ -1.34
TPM4P67936 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.7□□□□□ -1.34
TPM4P67936 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.7□□□□□ -1.34
TPM4P67936 BX276092.8-201ENST00000455722 250 ntBASIC6.7□□□□□ -1.34
TPM4P67936 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.7□□□□□ -1.34
TPM4P67936 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 AC022730.1-201ENST00000473114 568 ntBASIC6.7□□□□□ -1.34
TPM4P67936 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 PDCL3P4-201ENST00000489621 720 ntBASIC6.7□□□□□ -1.34
TPM4P67936 GM2AP2-201ENST00000491764 562 ntBASIC6.7□□□□□ -1.34
TPM4P67936 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.7□□□□□ -1.34
TPM4P67936 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.7□□□□□ -1.34
TPM4P67936 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.7□□□□□ -1.34
TPM4P67936 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.7□□□□□ -1.34
TPM4P67936 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM4P67936 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM4P67936 ZNF322P1-201ENST00000568013 1209 ntBASIC6.7□□□□□ -1.34
TPM4P67936 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM4P67936 AC026898.1-201ENST00000586404 571 ntBASIC6.7□□□□□ -1.34
TPM4P67936 AC119403.2-201ENST00000590960 598 ntBASIC6.7□□□□□ -1.34
TPM4P67936 AL133481.2-203ENST00000607558 139 ntBASIC6.7□□□□□ -1.34
TPM4P67936 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM4P67936 MIR6811-201ENST00000620409 58 ntBASIC6.7□□□□□ -1.34
TPM4P67936 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.7□□□□□ -1.34
TPM4P67936 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM4P67936 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
TPM4P67936 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.7□□□□□ -1.34
TPM4P67936 AP005435.3-201ENST00000531260 3198 ntBASIC6.7□□□□□ -1.34
TPM4P67936 GTF2IP4-201ENST00000453092 2054 ntBASIC6.7□□□□□ -1.34
TPM4P67936 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
TPM4P67936 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM4P67936 AC114774.1-201ENST00000507410 1770 ntBASIC6.69□□□□□ -1.34
TPM4P67936 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TPM4P67936 BX284613.1-201ENST00000452221 1641 ntBASIC6.69□□□□□ -1.34
TPM4P67936 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TPM4P67936 AC004158.1-201ENST00000564508 4319 ntBASIC6.69□□□□□ -1.34
TPM4P67936 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.69□□□□□ -1.34
TPM4P67936 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.69□□□□□ -1.34
TPM4P67936 RNU105B-201ENST00000364478 208 ntBASIC6.69□□□□□ -1.34
TPM4P67936 ADAM24P-201ENST00000398655 2101 ntBASIC6.69□□□□□ -1.34
TPM4P67936 AL139100.1-201ENST00000408001 498 ntBASIC6.69□□□□□ -1.34
TPM4P67936 DHFRP2-201ENST00000414224 547 ntBASIC6.69□□□□□ -1.34
TPM4P67936 RPS15AP30-201ENST00000420976 390 ntBASIC6.69□□□□□ -1.34
TPM4P67936 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.69□□□□□ -1.34
TPM4P67936 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.69□□□□□ -1.34
TPM4P67936 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.69□□□□□ -1.34
TPM4P67936 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.69□□□□□ -1.34
TPM4P67936 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.69□□□□□ -1.34
TPM4P67936 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.69□□□□□ -1.34
TPM4P67936 AC009244.1-201ENST00000450566 258 ntBASIC6.69□□□□□ -1.34
TPM4P67936 HIGD1AP16-201ENST00000450986 258 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms