Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
SUMO3P55854 AC020779.1-201ENST00000478757 796 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.06□□□□□ -1.44
SUMO3P55854 AC122714.1-201ENST00000502510 459 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.06□□□□□ -1.44
SUMO3P55854 AC093325.1-201ENST00000508378 326 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC096754.1-201ENST00000508904 818 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.06□□□□□ -1.44
SUMO3P55854 BTG4P1-201ENST00000510421 183 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 IGLV3-6-201ENST00000523937 250 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SUMO3P55854 AC118942.1-201ENST00000529674 1035 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 OR9G2P-201ENST00000533326 880 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 MTND1P24-201ENST00000552175 861 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.06□□□□□ -1.44
SUMO3P55854 AL162632.2-201ENST00000553933 399 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 CCDC58P1-201ENST00000578567 430 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 MIR3159-201ENST00000584572 74 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC069431.2-201ENST00000604149 1099 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC013244.3-201ENST00000605614 388 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC025175.1-201ENST00000606482 759 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 OR7A19P-201ENST00000608051 733 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC245100.7-201ENST00000609678 442 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC005277.2-201ENST00000617898 390 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AL512427.1-201ENST00000618593 349 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.06□□□□□ -1.44
SUMO3P55854 AC012653.2-201ENST00000621880 420 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC068787.1-201ENST00000623908 691 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC018692.2-201ENST00000624130 348 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC061999.1-201ENST00000624454 177 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.06□□□□□ -1.44
SUMO3P55854 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.06□□□□□ -1.44
SUMO3P55854 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.06□□□□□ -1.44
SUMO3P55854 AC006927.2-201ENST00000639256 389 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SUMO3P55854 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 MAPK10-383ENST00000642032 3390 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.06□□□□□ -1.44
SUMO3P55854 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SUMO3P55854 LPAL2-203ENST00000454031 2498 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.05□□□□□ -1.44
SUMO3P55854 MFSD8-213ENST00000641134 1327 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.05□□□□□ -1.44
SUMO3P55854 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.05□□□□□ -1.44
SUMO3P55854 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.05□□□□□ -1.44
SUMO3P55854 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SUMO3P55854 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SUMO3P55854 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.05□□□□□ -1.44
SUMO3P55854 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
SUMO3P55854 RNU6-207P-201ENST00000384137 107 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.05□□□□□ -1.44
SUMO3P55854 AL096711.1-201ENST00000404780 554 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 AL590635.1-201ENST00000406314 586 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 AL353133.1-201ENST00000407695 401 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 Z68694.1-201ENST00000413929 841 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.05□□□□□ -1.44
SUMO3P55854 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.05□□□□□ -1.44
SUMO3P55854 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.05□□□□□ -1.44
SUMO3P55854 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.05□□□□□ -1.44
SUMO3P55854 AC008173.1-201ENST00000418901 264 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 AP003385.1-201ENST00000426387 893 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 FO393414.1-201ENST00000428697 1184 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 FABP5P2-201ENST00000439042 408 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SUMO3P55854 PMS2P9-201ENST00000441237 515 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.05□□□□□ -1.44
SUMO3P55854 AL121578.2-201ENST00000448797 447 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 TVP23CP1-201ENST00000450317 639 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.05□□□□□ -1.44
SUMO3P55854 HMGB1P5-202ENST00000451497 985 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 NPM1P9-201ENST00000453156 844 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.05□□□□□ -1.44
SUMO3P55854 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.05□□□□□ -1.44
SUMO3P55854 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.05□□□□□ -1.44
SUMO3P55854 AC096571.1-202ENST00000506634 735 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.05□□□□□ -1.44
SUMO3P55854 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.05□□□□□ -1.44
SUMO3P55854 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.05□□□□□ -1.44
SUMO3P55854 RN7SKP141-201ENST00000516167 338 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 IGHV3-57-201ENST00000520143 280 ntBASIC6.05□□□□□ -1.44
SUMO3P55854 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.05□□□□□ -1.44
SUMO3P55854 CHEK2P2-201ENST00000554701 672 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms