Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RN7SL230P-201ENST00000580835 303 ntBASIC5.72□□□□□ -1.49
CDH11P55287 AC090616.1-201ENST00000583895 447 ntBASIC5.72□□□□□ -1.49
CDH11P55287 AC114477.1-201ENST00000605097 605 ntBASIC5.72□□□□□ -1.49
CDH11P55287 BNIP3P7-201ENST00000605641 516 ntBASIC5.72□□□□□ -1.49
CDH11P55287 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH11P55287 AL031658.2-201ENST00000616850 651 ntBASIC5.72□□□□□ -1.49
CDH11P55287 MIR6806-201ENST00000622141 64 ntBASIC5.72□□□□□ -1.49
CDH11P55287 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH11P55287 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
CDH11P55287 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CDH11P55287 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
CDH11P55287 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH11P55287 AC125238.2-201ENST00000430003 1440 ntBASIC5.72□□□□□ -1.49
CDH11P55287 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH11P55287 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH11P55287 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH11P55287 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDH11P55287 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
CDH11P55287 GUCY1B2-204ENST00000531898 1979 ntBASIC5.71□□□□□ -1.49
CDH11P55287 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH11P55287 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH11P55287 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CDH11P55287 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.71□□□□□ -1.5
CDH11P55287 YWHAZP4-201ENST00000392459 708 ntBASIC5.71□□□□□ -1.5
CDH11P55287 VN1R12P-201ENST00000403778 876 ntBASIC5.71□□□□□ -1.5
CDH11P55287 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH11P55287 AL360013.1-201ENST00000419031 858 ntBASIC5.71□□□□□ -1.5
CDH11P55287 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH11P55287 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH11P55287 TIMM8BP2-201ENST00000445940 251 ntBASIC5.71□□□□□ -1.5
CDH11P55287 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH11P55287 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH11P55287 AC118758.1-202ENST00000454719 225 ntBASIC5.71□□□□□ -1.5
CDH11P55287 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH11P55287 AC122718.2-201ENST00000505325 591 ntBASIC5.71□□□□□ -1.5
CDH11P55287 AC113367.2-201ENST00000505749 160 ntBASIC5.71□□□□□ -1.5
CDH11P55287 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH11P55287 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH11P55287 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH11P55287 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH11P55287 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH11P55287 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH11P55287 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH11P55287 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH11P55287 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH11P55287 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH11P55287 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH11P55287 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH11P55287 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH11P55287 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH11P55287 MIR3189-201ENST00000578735 73 ntBASIC5.71□□□□□ -1.5
CDH11P55287 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH11P55287 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH11P55287 AL352984.2-202ENST00000613699 155 ntBASIC5.71□□□□□ -1.5
CDH11P55287 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH11P55287 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH11P55287 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CDH11P55287 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CDH11P55287 CAP1P2-201ENST00000417455 1409 ntBASIC5.71□□□□□ -1.5
CDH11P55287 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH11P55287 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH11P55287 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH11P55287 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH11P55287 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CDH11P55287 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH11P55287 AL359976.1-201ENST00000418655 3528 ntBASIC5.7□□□□□ -1.5
CDH11P55287 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH11P55287 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH11P55287 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH11P55287 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH11P55287 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDH11P55287 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH11P55287 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH11P55287 OR56A4-201ENST00000330728 1209 ntBASIC5.7□□□□□ -1.5
CDH11P55287 RNU1-84P-201ENST00000365447 164 ntBASIC5.7□□□□□ -1.5
CDH11P55287 GNG5P2-201ENST00000372054 207 ntBASIC5.7□□□□□ -1.5
CDH11P55287 MIR433-201ENST00000384837 93 ntBASIC5.7□□□□□ -1.5
CDH11P55287 PSMA6P1-201ENST00000400275 741 ntBASIC5.7□□□□□ -1.5
CDH11P55287 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH11P55287 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH11P55287 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 AC016027.5-201ENST00000427227 210 ntBASIC5.7□□□□□ -1.5
CDH11P55287 AC002069.1-201ENST00000429649 1159 ntBASIC5.7□□□□□ -1.5
CDH11P55287 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH11P55287 AL390879.1-201ENST00000439143 386 ntBASIC5.7□□□□□ -1.5
CDH11P55287 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH11P55287 DNAJC19P5-201ENST00000443295 316 ntBASIC5.7□□□□□ -1.5
CDH11P55287 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH11P55287 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH11P55287 RN7SL39P-201ENST00000462264 297 ntBASIC5.7□□□□□ -1.5
CDH11P55287 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.7□□□□□ -1.5
CDH11P55287 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 RPL3P13-201ENST00000550415 216 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms