Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PMS1P54277 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
PMS1P54277 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
PMS1P54277 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
PMS1P54277 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
PMS1P54277 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.38□□□□□ -1.23
PMS1P54277 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PMS1P54277 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PMS1P54277 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
PMS1P54277 MTCO1P25-201ENST00000414449 1799 ntBASIC7.38□□□□□ -1.23
PMS1P54277 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PMS1P54277 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
PMS1P54277 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PMS1P54277 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.38□□□□□ -1.23
PMS1P54277 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PMS1P54277 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
PMS1P54277 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
PMS1P54277 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
PMS1P54277 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.37□□□□□ -1.23
PMS1P54277 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
PMS1P54277 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 AC012213.2-201ENST00000562917 4597 ntBASIC7.37□□□□□ -1.23
PMS1P54277 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 AC020658.2-201ENST00000559030 4020 ntBASIC7.37□□□□□ -1.23
PMS1P54277 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
PMS1P54277 LCOR-201ENST00000286067 4542 ntBASIC7.37□□□□□ -1.23
PMS1P54277 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.37□□□□□ -1.23
PMS1P54277 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 SNORA70G-201ENST00000383923 142 ntBASIC7.37□□□□□ -1.23
PMS1P54277 MIR187-201ENST00000385062 109 ntBASIC7.37□□□□□ -1.23
PMS1P54277 AL590635.1-201ENST00000406314 586 ntBASIC7.37□□□□□ -1.23
PMS1P54277 UBE2V1P11-201ENST00000411559 285 ntBASIC7.37□□□□□ -1.23
PMS1P54277 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.37□□□□□ -1.23
PMS1P54277 VN1R31P-201ENST00000417498 730 ntBASIC7.37□□□□□ -1.23
PMS1P54277 RPL18AP14-201ENST00000417685 526 ntBASIC7.37□□□□□ -1.23
PMS1P54277 MTND2P18-201ENST00000419962 1030 ntBASIC7.37□□□□□ -1.23
PMS1P54277 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC7.37□□□□□ -1.23
PMS1P54277 RAB9AP5-201ENST00000437794 597 ntBASIC7.37□□□□□ -1.23
PMS1P54277 RAB9AP2-201ENST00000443911 597 ntBASIC7.37□□□□□ -1.23
PMS1P54277 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC7.37□□□□□ -1.23
PMS1P54277 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC7.37□□□□□ -1.23
PMS1P54277 RPL23AP64-201ENST00000469465 435 ntBASIC7.37□□□□□ -1.23
PMS1P54277 PRDX3P4-201ENST00000470828 747 ntBASIC7.37□□□□□ -1.23
PMS1P54277 SNORA58-201ENST00000505219 137 ntBASIC7.37□□□□□ -1.23
PMS1P54277 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC7.37□□□□□ -1.23
PMS1P54277 GOLGA5P1-201ENST00000507317 980 ntBASIC7.37□□□□□ -1.23
PMS1P54277 AC113420.1-201ENST00000507903 571 ntBASIC7.37□□□□□ -1.23
PMS1P54277 GAPDHP71-201ENST00000511530 1003 ntBASIC7.37□□□□□ -1.23
PMS1P54277 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.37□□□□□ -1.23
PMS1P54277 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.37□□□□□ -1.23
PMS1P54277 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.37□□□□□ -1.23
PMS1P54277 ZNF321P-202ENST00000550843 495 ntBASIC7.37□□□□□ -1.23
PMS1P54277 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.37□□□□□ -1.23
PMS1P54277 AC104229.1-201ENST00000561364 255 ntBASIC7.37□□□□□ -1.23
PMS1P54277 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.37□□□□□ -1.23
PMS1P54277 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.37□□□□□ -1.23
PMS1P54277 AC106785.4-201ENST00000569492 412 ntBASIC7.37□□□□□ -1.23
PMS1P54277 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.37□□□□□ -1.23
PMS1P54277 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 PART1_2.1-201ENST00000612397 250 ntBASIC7.37□□□□□ -1.23
PMS1P54277 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.37□□□□□ -1.23
PMS1P54277 MIR3974-201ENST00000637126 96 ntBASIC7.37□□□□□ -1.23
PMS1P54277 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 AL022393.1-201ENST00000625142 1677 ntBASIC7.37□□□□□ -1.23
PMS1P54277 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.37□□□□□ -1.23
PMS1P54277 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.37□□□□□ -1.23
PMS1P54277 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PMS1P54277 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
PMS1P54277 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
PMS1P54277 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.36□□□□□ -1.23
PMS1P54277 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PMS1P54277 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.36□□□□□ -1.23
PMS1P54277 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PMS1P54277 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PMS1P54277 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PMS1P54277 SUCLA2P2-201ENST00000417269 1309 ntBASIC7.36□□□□□ -1.23
PMS1P54277 AL139384.2-201ENST00000613809 3590 ntBASIC7.36□□□□□ -1.23
PMS1P54277 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PMS1P54277 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
PMS1P54277 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PMS1P54277 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PMS1P54277 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms