Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.34□□□□□ -1.23
NUP98P52948 SRRM1P3-201ENST00000426911 2678 ntBASIC7.34□□□□□ -1.23
NUP98P52948 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC7.34□□□□□ -1.23
NUP98P52948 AC241584.2-201ENST00000637142 2090 ntBASIC7.34□□□□□ -1.23
NUP98P52948 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
NUP98P52948 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 Z83820.1-201ENST00000456978 1499 ntBASIC7.34□□□□□ -1.23
NUP98P52948 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 AL590763.1-201ENST00000398297 1545 ntBASIC7.34□□□□□ -1.24
NUP98P52948 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
NUP98P52948 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.34□□□□□ -1.24
NUP98P52948 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
NUP98P52948 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.24
NUP98P52948 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.34□□□□□ -1.24
NUP98P52948 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
NUP98P52948 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.34□□□□□ -1.24
NUP98P52948 AC006335.2-201ENST00000437993 330 ntBASIC7.34□□□□□ -1.24
NUP98P52948 AL133445.1-201ENST00000467051 452 ntBASIC7.34□□□□□ -1.24
NUP98P52948 RPL38P3-201ENST00000484463 213 ntBASIC7.34□□□□□ -1.24
NUP98P52948 AC009120.1-201ENST00000493458 473 ntBASIC7.34□□□□□ -1.24
NUP98P52948 AC108693.1-201ENST00000496068 432 ntBASIC7.34□□□□□ -1.24
NUP98P52948 AC008429.4-201ENST00000521201 182 ntBASIC7.34□□□□□ -1.24
NUP98P52948 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.34□□□□□ -1.24
NUP98P52948 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
NUP98P52948 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.34□□□□□ -1.24
NUP98P52948 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
NUP98P52948 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NUP98P52948 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.33□□□□□ -1.24
NUP98P52948 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NUP98P52948 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NUP98P52948 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
NUP98P52948 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NUP98P52948 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.33□□□□□ -1.24
NUP98P52948 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NUP98P52948 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NUP98P52948 AL353626.3-201ENST00000413399 657 ntBASIC7.33□□□□□ -1.24
NUP98P52948 Z93019.1-201ENST00000416450 973 ntBASIC7.33□□□□□ -1.24
NUP98P52948 RN7SL222P-201ENST00000476452 299 ntBASIC7.33□□□□□ -1.24
NUP98P52948 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.33□□□□□ -1.24
NUP98P52948 AC139365.2-201ENST00000517972 253 ntBASIC7.33□□□□□ -1.24
NUP98P52948 OR4A42P-201ENST00000531397 938 ntBASIC7.33□□□□□ -1.24
NUP98P52948 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.33□□□□□ -1.24
NUP98P52948 AC090424.1-201ENST00000535243 736 ntBASIC7.33□□□□□ -1.24
NUP98P52948 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.33□□□□□ -1.24
NUP98P52948 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.33□□□□□ -1.24
NUP98P52948 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.33□□□□□ -1.24
NUP98P52948 MIR193BHG-214ENST00000641765 509 ntBASIC7.33□□□□□ -1.24
NUP98P52948 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NUP98P52948 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.33□□□□□ -1.24
NUP98P52948 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NUP98P52948 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NUP98P52948 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
NUP98P52948 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 RNA5SP183-201ENST00000362452 119 ntBASIC7.32□□□□□ -1.24
NUP98P52948 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
NUP98P52948 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.32□□□□□ -1.24
NUP98P52948 OR7E116P-201ENST00000448529 957 ntBASIC7.32□□□□□ -1.24
NUP98P52948 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 RN7SL727P-201ENST00000482164 296 ntBASIC7.32□□□□□ -1.24
NUP98P52948 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.32□□□□□ -1.24
NUP98P52948 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.32□□□□□ -1.24
NUP98P52948 AC004808.2-201ENST00000627965 773 ntBASIC7.32□□□□□ -1.24
NUP98P52948 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 PABPC1P8-201ENST00000452851 2086 ntBASIC7.32□□□□□ -1.24
NUP98P52948 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.32□□□□□ -1.24
NUP98P52948 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
NUP98P52948 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.32□□□□□ -1.24
NUP98P52948 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
NUP98P52948 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.32□□□□□ -1.24
NUP98P52948 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
NUP98P52948 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NUP98P52948 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NUP98P52948 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.31□□□□□ -1.24
NUP98P52948 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.31□□□□□ -1.24
NUP98P52948 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.31□□□□□ -1.24
NUP98P52948 AC023141.8-201ENST00000442554 208 ntBASIC7.31□□□□□ -1.24
NUP98P52948 AC019185.1-201ENST00000442718 389 ntBASIC7.31□□□□□ -1.24
NUP98P52948 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.31□□□□□ -1.24
NUP98P52948 CCDC11P1-201ENST00000503137 1162 ntBASIC7.31□□□□□ -1.24
NUP98P52948 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.31□□□□□ -1.24
NUP98P52948 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms