Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.05□□□□□ -1.44
PDX1P52945 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.05□□□□□ -1.44
PDX1P52945 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.05□□□□□ -1.44
PDX1P52945 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.05□□□□□ -1.44
PDX1P52945 AC090616.1-201ENST00000583895 447 ntBASIC6.05□□□□□ -1.44
PDX1P52945 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.05□□□□□ -1.44
PDX1P52945 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.05□□□□□ -1.44
PDX1P52945 AP001823.1-201ENST00000604056 1003 ntBASIC6.05□□□□□ -1.44
PDX1P52945 AC015849.6-201ENST00000605454 474 ntBASIC6.05□□□□□ -1.44
PDX1P52945 BX323046.1-201ENST00000610145 535 ntBASIC6.05□□□□□ -1.44
PDX1P52945 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.05□□□□□ -1.44
PDX1P52945 AC107308.1-201ENST00000615897 301 ntBASIC6.05□□□□□ -1.44
PDX1P52945 AC129778.1-202ENST00000623812 261 ntBASIC6.05□□□□□ -1.44
PDX1P52945 SNORA17.5-201ENST00000630429 132 ntBASIC6.05□□□□□ -1.44
PDX1P52945 AL591379.1-207ENST00000635982 261 ntBASIC6.05□□□□□ -1.44
PDX1P52945 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.05□□□□□ -1.44
PDX1P52945 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PDX1P52945 AC022034.1-201ENST00000512867 2156 ntBASIC6.05□□□□□ -1.44
PDX1P52945 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PDX1P52945 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.05□□□□□ -1.44
PDX1P52945 AC007342.9-201ENST00000623877 1385 ntBASIC6.05□□□□□ -1.44
PDX1P52945 AL157831.2-201ENST00000564681 3095 ntBASIC6.05□□□□□ -1.44
PDX1P52945 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDX1P52945 AC099654.3-201ENST00000447087 1546 ntBASIC6.04□□□□□ -1.44
PDX1P52945 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.04□□□□□ -1.44
PDX1P52945 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
PDX1P52945 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
PDX1P52945 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 DOCK11P1-201ENST00000553480 5932 ntBASIC6.04□□□□□ -1.44
PDX1P52945 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PDX1P52945 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.04□□□□□ -1.44
PDX1P52945 WBP11P1-201ENST00000562560 1931 ntBASIC6.04□□□□□ -1.44
PDX1P52945 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PDX1P52945 RN7SKP81-201ENST00000365603 331 ntBASIC6.04□□□□□ -1.44
PDX1P52945 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PDX1P52945 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.04□□□□□ -1.44
PDX1P52945 AC097721.1-201ENST00000427150 1253 ntBASIC6.04□□□□□ -1.44
PDX1P52945 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.04□□□□□ -1.44
PDX1P52945 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.04□□□□□ -1.44
PDX1P52945 AC007998.1-201ENST00000474156 672 ntBASIC6.04□□□□□ -1.44
PDX1P52945 RN7SL174P-201ENST00000475578 289 ntBASIC6.04□□□□□ -1.44
PDX1P52945 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
PDX1P52945 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.04□□□□□ -1.44
PDX1P52945 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.04□□□□□ -1.44
PDX1P52945 PSMA2P2-201ENST00000504319 686 ntBASIC6.04□□□□□ -1.44
PDX1P52945 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 SNORD46.2-201ENST00000516021 102 ntBASIC6.04□□□□□ -1.44
PDX1P52945 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.04□□□□□ -1.44
PDX1P52945 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.04□□□□□ -1.44
PDX1P52945 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 AC007956.1-201ENST00000555623 542 ntBASIC6.04□□□□□ -1.44
PDX1P52945 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.04□□□□□ -1.44
PDX1P52945 MIR4301-201ENST00000577203 66 ntBASIC6.04□□□□□ -1.44
PDX1P52945 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.04□□□□□ -1.44
PDX1P52945 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.04□□□□□ -1.44
PDX1P52945 AC091193.1-201ENST00000604640 448 ntBASIC6.04□□□□□ -1.44
PDX1P52945 AL591167.1-201ENST00000607321 456 ntBASIC6.04□□□□□ -1.44
PDX1P52945 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 CASC19-238ENST00000641523 1558 ntBASIC6.04□□□□□ -1.44
PDX1P52945 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDX1P52945 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.04□□□□□ -1.44
PDX1P52945 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.04□□□□□ -1.44
PDX1P52945 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
PDX1P52945 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.04□□□□□ -1.44
PDX1P52945 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.04□□□□□ -1.44
PDX1P52945 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.03□□□□□ -1.44
PDX1P52945 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDX1P52945 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDX1P52945 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDX1P52945 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.03□□□□□ -1.44
PDX1P52945 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDX1P52945 CR383656.5-201ENST00000547616 1340 ntBASIC6.03□□□□□ -1.44
PDX1P52945 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDX1P52945 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.03□□□□□ -1.44
PDX1P52945 AP001157.1-201ENST00000550837 2339 ntBASIC6.03□□□□□ -1.44
PDX1P52945 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms