Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.62□□□□□ -1.35
SSR1P43307 AC006924.1-201ENST00000610750 559 ntBASIC6.62□□□□□ -1.35
SSR1P43307 RNA5SP439-201ENST00000617595 124 ntBASIC6.62□□□□□ -1.35
SSR1P43307 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SSR1P43307 MIR7159-201ENST00000620587 66 ntBASIC6.62□□□□□ -1.35
SSR1P43307 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.62□□□□□ -1.35
SSR1P43307 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.62□□□□□ -1.35
SSR1P43307 AC116667.2-201ENST00000641075 823 ntBASIC6.62□□□□□ -1.35
SSR1P43307 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
SSR1P43307 AOX3P-204ENST00000491025 2107 ntBASIC6.62□□□□□ -1.35
SSR1P43307 GVINP1-202ENST00000531871 7271 ntBASIC6.62□□□□□ -1.35
SSR1P43307 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSR1P43307 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
SSR1P43307 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSR1P43307 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.62□□□□□ -1.35
SSR1P43307 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSR1P43307 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.62□□□□□ -1.35
SSR1P43307 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SSR1P43307 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.61□□□□□ -1.35
SSR1P43307 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 CASC19-248ENST00000641674 1356 ntBASIC6.61□□□□□ -1.35
SSR1P43307 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 AP001541.1-201ENST00000623322 1904 ntBASIC6.61□□□□□ -1.35
SSR1P43307 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 RNA5SP485-201ENST00000365053 119 ntBASIC6.61□□□□□ -1.35
SSR1P43307 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SSR1P43307 GPN3P1-201ENST00000423883 535 ntBASIC6.61□□□□□ -1.35
SSR1P43307 HSPE1P27-201ENST00000430808 296 ntBASIC6.61□□□□□ -1.35
SSR1P43307 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.61□□□□□ -1.35
SSR1P43307 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.61□□□□□ -1.35
SSR1P43307 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.61□□□□□ -1.35
SSR1P43307 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.61□□□□□ -1.35
SSR1P43307 AL022237.1-201ENST00000446663 358 ntBASIC6.61□□□□□ -1.35
SSR1P43307 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.61□□□□□ -1.35
SSR1P43307 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
SSR1P43307 RN7SL83P-201ENST00000468131 297 ntBASIC6.61□□□□□ -1.35
SSR1P43307 AC010343.2-201ENST00000510162 224 ntBASIC6.61□□□□□ -1.35
SSR1P43307 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.61□□□□□ -1.35
SSR1P43307 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.61□□□□□ -1.35
SSR1P43307 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.61□□□□□ -1.35
SSR1P43307 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.61□□□□□ -1.35
SSR1P43307 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.61□□□□□ -1.35
SSR1P43307 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 AL133399.1-201ENST00000527476 298 ntBASIC6.61□□□□□ -1.35
SSR1P43307 HMGN1P26-201ENST00000558737 303 ntBASIC6.61□□□□□ -1.35
SSR1P43307 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.61□□□□□ -1.35
SSR1P43307 RN7SL475P-201ENST00000583379 298 ntBASIC6.61□□□□□ -1.35
SSR1P43307 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.61□□□□□ -1.35
SSR1P43307 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.61□□□□□ -1.35
SSR1P43307 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.61□□□□□ -1.35
SSR1P43307 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.61□□□□□ -1.35
SSR1P43307 AC138965.3-201ENST00000623875 498 ntBASIC6.61□□□□□ -1.35
SSR1P43307 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.61□□□□□ -1.35
SSR1P43307 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SSR1P43307 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 USP9YP3-201ENST00000434481 1766 ntBASIC6.61□□□□□ -1.35
SSR1P43307 AC011504.1-201ENST00000623331 4103 ntBASIC6.61□□□□□ -1.35
SSR1P43307 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.61□□□□□ -1.35
SSR1P43307 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSR1P43307 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.6□□□□□ -1.35
SSR1P43307 DDX18P6-201ENST00000450119 1997 ntBASIC6.6□□□□□ -1.35
SSR1P43307 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSR1P43307 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SSR1P43307 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSR1P43307 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.6□□□□□ -1.35
SSR1P43307 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SSR1P43307 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.6□□□□□ -1.35
SSR1P43307 RNU11-6P-201ENST00000391127 133 ntBASIC6.6□□□□□ -1.35
SSR1P43307 AL445238.1-204ENST00000400311 463 ntBASIC6.6□□□□□ -1.35
SSR1P43307 RNA5SP296-201ENST00000410523 111 ntBASIC6.6□□□□□ -1.35
SSR1P43307 UBTFL2-201ENST00000411859 1191 ntBASIC6.6□□□□□ -1.35
SSR1P43307 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.6□□□□□ -1.35
SSR1P43307 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.6□□□□□ -1.35
SSR1P43307 AL121878.1-201ENST00000418638 859 ntBASIC6.6□□□□□ -1.35
SSR1P43307 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.6□□□□□ -1.35
SSR1P43307 WDR82P2-201ENST00000444540 928 ntBASIC6.6□□□□□ -1.35
SSR1P43307 AL022319.1-201ENST00000458183 1167 ntBASIC6.6□□□□□ -1.35
SSR1P43307 AC022730.1-201ENST00000473114 568 ntBASIC6.6□□□□□ -1.35
SSR1P43307 AC135999.1-201ENST00000478962 479 ntBASIC6.6□□□□□ -1.35
SSR1P43307 RPL5P22-201ENST00000480199 884 ntBASIC6.6□□□□□ -1.35
SSR1P43307 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
SSR1P43307 OR11I1P-201ENST00000486033 954 ntBASIC6.6□□□□□ -1.35
SSR1P43307 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.6□□□□□ -1.35
SSR1P43307 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.6□□□□□ -1.35
SSR1P43307 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSR1P43307 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.6□□□□□ -1.35
SSR1P43307 CASP1P2-201ENST00000526830 1258 ntBASIC6.6□□□□□ -1.35
SSR1P43307 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms