Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMAP28067 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DMAP28067 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMAP28067 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMAP28067 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMAP28067 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DMAP28067 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DMAP28067 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DMAP28067 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMAP28067 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMAP28067 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMAP28067 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMAP28067 AL137141.1-201ENST00000624622 4836 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 TUBBP10-201ENST00000427668 1301 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC100810.3-201ENST00000633189 2240 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 MRPS6P2-201ENST00000381143 370 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 SNORA11D-201ENST00000408548 128 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 SNORA11E-201ENST00000408778 128 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 RN7SKP30-201ENST00000411373 334 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 RPSAP65-201ENST00000429660 595 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 RN7SL714P-201ENST00000487050 298 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC021733.2-201ENST00000518830 497 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC126615.2-201ENST00000553003 515 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC092718.4-201ENST00000566639 716 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC090826.1-203ENST00000569235 490 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC015674.1-201ENST00000578482 267 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC073046.2-201ENST00000604756 527 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 CDY3P-201ENST00000454543 1618 ntBASIC5.23□□□□□ -1.57
HLA-DMAP28067 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DMAP28067 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DMAP28067 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AC010132.4-201ENST00000569883 1368 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 RNA5SP140-201ENST00000364524 92 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AL445213.1-201ENST00000412589 747 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 AC009303.1-201ENST00000426307 352 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AC092421.1-201ENST00000448148 418 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 RPS4XP12-201ENST00000461747 709 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 RN7SL352P-201ENST00000466002 277 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 AC023424.1-201ENST00000496058 459 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 AC138409.2-202ENST00000507274 458 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AC092865.1-201ENST00000544395 1023 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 BMS1P16-201ENST00000556075 1147 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms