Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC113367.2-201ENST00000505749 160 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC095052.1-201ENST00000509955 863 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC090958.1-201ENST00000511122 351 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC092865.1-201ENST00000544395 1023 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC135626.1-201ENST00000556983 435 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC090651.1-201ENST00000567865 634 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AP001823.1-201ENST00000604056 1003 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 U1.34-201ENST00000618578 162 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 OR7A1P-202ENST00000641542 1158 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 OR8A1-204ENST00000642111 1145 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC011504.1-201ENST00000623331 4103 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AP003486.1-201ENST00000525716 3994 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 OFD1P17-201ENST00000437639 3018 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AL442128.2-201ENST00000620246 1824 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 AC079753.1-201ENST00000623243 3868 ntBASIC6.25□□□□□ -1.41
HLA-DPA1P20036 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 NAMPTP1-201ENST00000440465 2514 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 PPBPP2-201ENST00000513150 1362 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 RN7SKP171-201ENST00000364417 303 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 MIR188-201ENST00000385034 86 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 RN7SKP151-201ENST00000410230 316 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 RNA5SP251-201ENST00000410614 137 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 RN7SL552P-201ENST00000462094 276 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 OR7E22P-201ENST00000478335 1035 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 SNX18P25-201ENST00000510539 758 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 Y_RNA.710-201ENST00000516975 110 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AL137067.2-201ENST00000621202 131 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 AL596275.2-207ENST00000641188 675 ntBASIC6.24□□□□□ -1.41
HLA-DPA1P20036 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HLA-DPA1P20036 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AC011416.1-201ENST00000514947 1732 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 RNA5SP232-201ENST00000364144 119 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AL121578.1-201ENST00000428051 892 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 BTG3P1-201ENST00000435859 716 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 TIMM8BP2-201ENST00000445940 251 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AC112187.1-201ENST00000455837 479 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AC019084.1-201ENST00000457337 432 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 RPL34P33-201ENST00000486062 334 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms