Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC009518.2-201ENST00000418056 731 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 HMGB1P49-201ENST00000418882 569 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 RPSAP1-201ENST00000421328 880 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 FTLP17-201ENST00000432567 525 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.77□□□□□ -1.33
COL6A2P12110 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.77□□□□□ -1.33
COL6A2P12110 AL157884.3-201ENST00000448273 1184 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 OR52I1-201ENST00000450052 1050 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.77□□□□□ -1.33
COL6A2P12110 RBMY2HP-201ENST00000457961 720 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 GAPDHP53-201ENST00000458397 924 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 SYT14P1-201ENST00000481459 721 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.77□□□□□ -1.33
COL6A2P12110 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 AC133963.2-201ENST00000513686 578 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.77□□□□□ -1.33
COL6A2P12110 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.77□□□□□ -1.33
COL6A2P12110 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 AC124891.1-201ENST00000536322 519 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.77□□□□□ -1.33
COL6A2P12110 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 CYB5AP5-201ENST00000549779 389 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.77□□□□□ -1.33
COL6A2P12110 MTND4P33-201ENST00000556706 766 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.77□□□□□ -1.33
COL6A2P12110 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 AC009094.1-201ENST00000564443 426 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 AC007346.2-201ENST00000564816 892 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 MTCYBP33-201ENST00000575007 1130 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.77□□□□□ -1.33
COL6A2P12110 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COL6A2P12110 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.77□□□□□ -1.33
COL6A2P12110 AL133370.2-201ENST00000619934 439 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.77□□□□□ -1.33
COL6A2P12110 SNX18P10-201ENST00000625014 519 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.77□□□□□ -1.33
COL6A2P12110 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 AC009120.2-204ENST00000621548 2032 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 AC137056.2-201ENST00000624055 1958 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
COL6A2P12110 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 AP002370.1-201ENST00000528055 1602 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.76□□□□□ -1.33
COL6A2P12110 AC022905.1-201ENST00000503430 3048 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL6A2P12110 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 SNORA30B-201ENST00000365319 129 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 SNORA70.5-201ENST00000365519 135 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.76□□□□□ -1.33
COL6A2P12110 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.76□□□□□ -1.33
COL6A2P12110 NPM1P38-201ENST00000403835 865 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 RNA5SP177-201ENST00000410122 107 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 AL445183.3-201ENST00000414168 502 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.76□□□□□ -1.33
COL6A2P12110 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.76□□□□□ -1.33
COL6A2P12110 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 AC084290.1-201ENST00000434995 374 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 MYL6P3-201ENST00000436904 432 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
COL6A2P12110 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.76□□□□□ -1.33
COL6A2P12110 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 AC019080.2-201ENST00000453859 394 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 NMNAT1P3-201ENST00000457517 888 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.76□□□□□ -1.33
COL6A2P12110 FTH1P8-201ENST00000498161 514 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AC010486.2-201ENST00000505572 483 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.76□□□□□ -1.33
COL6A2P12110 Vault.2-201ENST00000516519 98 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 MTCO1P47-201ENST00000523889 1271 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 NDUFA3P2-201ENST00000531434 232 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 ZNF321P-202ENST00000550843 495 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 NPM1P5-201ENST00000557228 838 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.76□□□□□ -1.33
COL6A2P12110 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms