Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SLC25A14P1-201ENST00000502867 901 ntBASIC10.23□□□□□ -0.77
TOP2AP11388 APPL2-203ENST00000546731 684 ntTSL 2 BASIC10.23□□□□□ -0.77
TOP2AP11388 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC10.23□□□□□ -0.77
TOP2AP11388 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC10.23□□□□□ -0.77
TOP2AP11388 AL118522.2-201ENST00000616045 615 ntBASIC10.23□□□□□ -0.77
TOP2AP11388 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TOP2AP11388 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
TOP2AP11388 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC10.22□□□□□ -0.77
TOP2AP11388 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
TOP2AP11388 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
TOP2AP11388 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC10.22□□□□□ -0.77
TOP2AP11388 ALB-209ENST00000503124 1741 ntTSL 5 BASIC10.22□□□□□ -0.77
TOP2AP11388 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
TOP2AP11388 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
TOP2AP11388 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
TOP2AP11388 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
TOP2AP11388 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
TOP2AP11388 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
TOP2AP11388 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
TOP2AP11388 MRM2-202ENST00000407040 582 ntTSL 3 BASIC10.22□□□□□ -0.77
TOP2AP11388 CYCSP12-201ENST00000437729 300 ntBASIC10.22□□□□□ -0.77
TOP2AP11388 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC10.22□□□□□ -0.77
TOP2AP11388 AC245047.2-201ENST00000441060 530 ntBASIC10.22□□□□□ -0.77
TOP2AP11388 NDUFA5P12-201ENST00000503796 343 ntBASIC10.22□□□□□ -0.77
TOP2AP11388 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC10.22□□□□□ -0.77
TOP2AP11388 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC10.22□□□□□ -0.77
TOP2AP11388 MIR4260-201ENST00000583107 67 ntBASIC10.22□□□□□ -0.77
TOP2AP11388 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC10.22□□□□□ -0.77
TOP2AP11388 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
TOP2AP11388 AC130304.1-201ENST00000622942 2385 ntBASIC10.22□□□□□ -0.77
TOP2AP11388 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC10.22□□□□□ -0.77
TOP2AP11388 MITF-203ENST00000328528 4680 ntTSL 5 BASIC10.22□□□□□ -0.77
TOP2AP11388 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
TOP2AP11388 AP000866.6-201ENST00000638898 3579 ntBASIC10.21□□□□□ -0.77
TOP2AP11388 AL645927.1-201ENST00000396783 406 ntBASIC10.21□□□□□ -0.78
TOP2AP11388 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC10.21□□□□□ -0.78
TOP2AP11388 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC10.21□□□□□ -0.78
TOP2AP11388 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC10.21□□□□□ -0.78
TOP2AP11388 BX284632.1-201ENST00000478218 541 ntBASIC10.21□□□□□ -0.78
TOP2AP11388 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
TOP2AP11388 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC10.21□□□□□ -0.78
TOP2AP11388 CYP4F27P-201ENST00000514557 494 ntBASIC10.21□□□□□ -0.78
TOP2AP11388 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC10.21□□□□□ -0.78
TOP2AP11388 RBM22P12-201ENST00000567098 1255 ntBASIC10.21□□□□□ -0.78
TOP2AP11388 MIR132-201ENST00000591554 101 ntBASIC10.21□□□□□ -0.78
TOP2AP11388 AL390318.1-201ENST00000624564 687 ntBASIC10.21□□□□□ -0.78
TOP2AP11388 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC10.21□□□□□ -0.78
TOP2AP11388 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC10.21□□□□□ -0.78
TOP2AP11388 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC10.21□□□□□ -0.78
TOP2AP11388 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TOP2AP11388 AL590004.4-201ENST00000566733 7060 ntBASIC10.21□□□□□ -0.78
TOP2AP11388 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
TOP2AP11388 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
TOP2AP11388 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC10.21□□□□□ -0.78
TOP2AP11388 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
TOP2AP11388 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TOP2AP11388 AC007938.2-201ENST00000604666 2634 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
TOP2AP11388 RNA5SP507-201ENST00000363603 121 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 AC006455.6-201ENST00000426192 893 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 EEF1B2P5-201ENST00000444820 548 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 FAR2P1-206ENST00000449736 709 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC10.2□□□□□ -0.78
TOP2AP11388 RPEP1-201ENST00000504507 658 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC10.2□□□□□ -0.78
TOP2AP11388 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC10.2□□□□□ -0.78
TOP2AP11388 AC015720.2-201ENST00000567709 334 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 AC092944.2-201ENST00000605443 889 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 AL445222.1-201ENST00000607259 628 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 AC008115.3-201ENST00000614874 549 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 AC037198.3-201ENST00000616754 526 ntBASIC10.2□□□□□ -0.78
TOP2AP11388 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC10.2□□□□□ -0.78
TOP2AP11388 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
TOP2AP11388 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
TOP2AP11388 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
TOP2AP11388 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
TOP2AP11388 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC10.2□□□□□ -0.78
TOP2AP11388 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOP2AP11388 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOP2AP11388 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC10.19□□□□□ -0.78
TOP2AP11388 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
TOP2AP11388 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC10.19□□□□□ -0.78
TOP2AP11388 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC10.19□□□□□ -0.78
TOP2AP11388 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOP2AP11388 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TOP2AP11388 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC10.19□□□□□ -0.78
TOP2AP11388 RNA5SP339-201ENST00000390987 122 ntBASIC10.19□□□□□ -0.78
TOP2AP11388 AC019205.1-201ENST00000421830 730 ntBASIC10.19□□□□□ -0.78
TOP2AP11388 PRUNEP1-201ENST00000425846 705 ntBASIC10.19□□□□□ -0.78
TOP2AP11388 RN7SL172P-201ENST00000460535 303 ntBASIC10.19□□□□□ -0.78
TOP2AP11388 RN7SL570P-201ENST00000484405 292 ntBASIC10.19□□□□□ -0.78
TOP2AP11388 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC10.19□□□□□ -0.78
TOP2AP11388 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC10.19□□□□□ -0.78
TOP2AP11388 AC011497.2-201ENST00000600255 639 ntBASIC10.19□□□□□ -0.78
TOP2AP11388 AC012616.1-201ENST00000600294 197 ntBASIC10.19□□□□□ -0.78
TOP2AP11388 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC10.19□□□□□ -0.78
TOP2AP11388 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOP2AP11388 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TOP2AP11388 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
TOP2AP11388 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms