Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC090607.2-201ENST00000560331 695 ntBASIC10.83□□□□□ -0.68
CHGAP10645 EIF5A2P1-201ENST00000564027 460 ntBASIC10.83□□□□□ -0.68
CHGAP10645 FGF7P1-201ENST00000582820 288 ntBASIC10.83□□□□□ -0.68
CHGAP10645 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CHGAP10645 MTCO2P22-201ENST00000603246 681 ntBASIC10.83□□□□□ -0.68
CHGAP10645 AC005518.2-201ENST00000603254 282 ntBASIC10.83□□□□□ -0.68
CHGAP10645 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC10.83□□□□□ -0.68
CHGAP10645 AC005034.5-201ENST00000604219 466 ntBASIC10.83□□□□□ -0.68
CHGAP10645 AC122710.3-201ENST00000606566 541 ntBASIC10.83□□□□□ -0.68
CHGAP10645 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC10.83□□□□□ -0.68
CHGAP10645 AC007497.1-201ENST00000610421 561 ntBASIC10.83□□□□□ -0.68
CHGAP10645 RN7SL536P-201ENST00000612366 290 ntBASIC10.83□□□□□ -0.68
CHGAP10645 AC007014.2-201ENST00000615581 479 ntBASIC10.83□□□□□ -0.68
CHGAP10645 RN7SL545P-201ENST00000620547 290 ntBASIC10.83□□□□□ -0.68
CHGAP10645 RN7SL759P-201ENST00000620768 290 ntBASIC10.83□□□□□ -0.68
CHGAP10645 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CHGAP10645 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CHGAP10645 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC10.83□□□□□ -0.68
CHGAP10645 AC016831.3-201ENST00000446451 1723 ntBASIC10.83□□□□□ -0.68
CHGAP10645 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CHGAP10645 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC10.83□□□□□ -0.68
CHGAP10645 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CHGAP10645 ELF2P3-201ENST00000445099 1506 ntBASIC10.83□□□□□ -0.68
CHGAP10645 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CHGAP10645 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CHGAP10645 AP005901.5-201ENST00000545779 1796 ntBASIC10.82□□□□□ -0.68
CHGAP10645 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CHGAP10645 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CHGAP10645 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 AC114980.1-201ENST00000505668 3157 ntBASIC10.82□□□□□ -0.68
CHGAP10645 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CHGAP10645 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
CHGAP10645 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC10.82□□□□□ -0.68
CHGAP10645 FABP7-201ENST00000356535 2086 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 AC010132.2-201ENST00000295493 1043 ntBASIC10.82□□□□□ -0.68
CHGAP10645 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 RNU4-76P-201ENST00000364509 141 ntBASIC10.82□□□□□ -0.68
CHGAP10645 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC10.82□□□□□ -0.68
CHGAP10645 OR6C69P-201ENST00000394268 893 ntBASIC10.82□□□□□ -0.68
CHGAP10645 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC10.82□□□□□ -0.68
CHGAP10645 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC10.82□□□□□ -0.68
CHGAP10645 RPS26P13-201ENST00000419030 330 ntBASIC10.82□□□□□ -0.68
CHGAP10645 AL390840.1-201ENST00000420303 988 ntBASIC10.82□□□□□ -0.68
CHGAP10645 MTND1P14-201ENST00000427400 950 ntBASIC10.82□□□□□ -0.68
CHGAP10645 USP12PX-201ENST00000432383 1057 ntBASIC10.82□□□□□ -0.68
CHGAP10645 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC10.82□□□□□ -0.68
CHGAP10645 OSTCP2-201ENST00000437956 444 ntBASIC10.82□□□□□ -0.68
CHGAP10645 AC092170.1-201ENST00000440211 356 ntBASIC10.82□□□□□ -0.68
CHGAP10645 LIN28AP2-201ENST00000445283 458 ntBASIC10.82□□□□□ -0.68
CHGAP10645 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC10.82□□□□□ -0.68
CHGAP10645 RPL12P7-201ENST00000493832 494 ntBASIC10.82□□□□□ -0.68
CHGAP10645 AC079395.1-201ENST00000510981 262 ntBASIC10.82□□□□□ -0.68
CHGAP10645 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC10.82□□□□□ -0.68
CHGAP10645 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC10.82□□□□□ -0.68
CHGAP10645 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC10.82□□□□□ -0.68
CHGAP10645 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CHGAP10645 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC10.82□□□□□ -0.68
CHGAP10645 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC10.82□□□□□ -0.68
CHGAP10645 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC10.82□□□□□ -0.68
CHGAP10645 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC10.82□□□□□ -0.68
CHGAP10645 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC10.82□□□□□ -0.68
CHGAP10645 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC10.82□□□□□ -0.68
CHGAP10645 AC025048.6-202ENST00000627667 438 ntBASIC10.82□□□□□ -0.68
CHGAP10645 AC233280.20-201ENST00000637412 416 ntBASIC10.82□□□□□ -0.68
CHGAP10645 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC10.82□□□□□ -0.68
CHGAP10645 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC10.82□□□□□ -0.68
CHGAP10645 AL353743.4-201ENST00000422653 1547 ntBASIC10.82□□□□□ -0.68
CHGAP10645 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC10.82□□□□□ -0.68
CHGAP10645 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC10.82□□□□□ -0.68
CHGAP10645 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CHGAP10645 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 FGG-201ENST00000336098 1659 ntTSL 2 BASIC10.82□□□□□ -0.68
CHGAP10645 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC10.82□□□□□ -0.68
CHGAP10645 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC10.82□□□□□ -0.68
CHGAP10645 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CHGAP10645 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHGAP10645 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC10.81□□□□□ -0.68
CHGAP10645 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC10.81□□□□□ -0.68
CHGAP10645 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHGAP10645 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC10.81□□□□□ -0.68
CHGAP10645 AC090643.1-201ENST00000623600 3100 ntBASIC10.81□□□□□ -0.68
CHGAP10645 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHGAP10645 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC10.81□□□□□ -0.68
CHGAP10645 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CHGAP10645 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC10.81□□□□□ -0.68
CHGAP10645 RPS3AP5-201ENST00000389400 821 ntBASIC10.81□□□□□ -0.68
CHGAP10645 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CHGAP10645 AL121977.1-201ENST00000401636 979 ntBASIC10.81□□□□□ -0.68
CHGAP10645 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC10.81□□□□□ -0.68
CHGAP10645 RPL21P108-201ENST00000413857 481 ntBASIC10.81□□□□□ -0.68
CHGAP10645 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CHGAP10645 AL109913.1-201ENST00000421173 514 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms