Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC010998.3-201ENST00000613871 631 ntBASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 AL096712.1-201ENST00000614561 159 ntBASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 MIR7159-201ENST00000620587 66 ntBASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 AC004836.1-201ENST00000623032 634 ntBASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 AC018659.2-201ENST00000624690 715 ntBASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 AC006511.3-201ENST00000624929 1783 ntBASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RAB40ALP0C0E4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AL353763.1-201ENST00000624467 1628 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 RNA5SP435-201ENST00000364044 108 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 RNA5SP122-201ENST00000384457 108 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 RN7SKP121-201ENST00000410842 305 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 MORF4-201ENST00000447135 971 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC007386.1-201ENST00000455212 582 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 RN7SL221P-201ENST00000466190 281 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 DEFB109A-201ENST00000482450 265 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 MTND3P6-201ENST00000485242 339 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 RNU6-943P-201ENST00000516960 98 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 TRIM77BP-201ENST00000524985 1119 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 GTF2IP11-201ENST00000526931 420 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC027369.2-201ENST00000528030 440 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 DPPA3P2-202ENST00000557188 1219 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC007346.1-201ENST00000569208 867 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC092944.2-201ENST00000605443 889 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 TCL6_3.1-201ENST00000619064 137 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC129778.1-202ENST00000623812 261 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 MTCO1P1-201ENST00000624263 1081 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AL591379.1-207ENST00000635982 261 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 MTCO1P28-201ENST00000574177 1528 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AL137058.3-201ENST00000624531 3099 ntBASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAB40ALP0C0E4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 AC023490.2-201ENST00000359859 470 ntBASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 SNORA70.9-201ENST00000384370 135 ntBASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 RNA5SP251-201ENST00000410614 137 ntBASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 AC097523.2-201ENST00000435551 652 ntBASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.91□□□□□ -1.46
RAB40ALP0C0E4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms