Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.81□□□□□ -1.16
HMGB1P09429 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 E2F6P1-201ENST00000428850 745 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.81□□□□□ -1.16
HMGB1P09429 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 E2F6P3-201ENST00000441743 743 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 RPSAP40-201ENST00000442343 891 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 AC099340.1-201ENST00000475247 599 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 AC092824.1-201ENST00000483524 576 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 H3F3AP3-201ENST00000497682 407 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.81□□□□□ -1.16
HMGB1P09429 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC7.81□□□□□ -1.16
HMGB1P09429 SLC25A51P2-201ENST00000535708 889 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
HMGB1P09429 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.81□□□□□ -1.16
HMGB1P09429 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.81□□□□□ -1.16
HMGB1P09429 AC096553.1-201ENST00000605169 829 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.81□□□□□ -1.16
HMGB1P09429 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.81□□□□□ -1.16
HMGB1P09429 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC7.81□□□□□ -1.16
HMGB1P09429 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.81□□□□□ -1.16
HMGB1P09429 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.81□□□□□ -1.16
HMGB1P09429 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.81□□□□□ -1.16
HMGB1P09429 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HMGB1P09429 AL391261.1-201ENST00000555712 1479 ntBASIC7.81□□□□□ -1.16
HMGB1P09429 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.8□□□□□ -1.16
HMGB1P09429 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC7.8□□□□□ -1.16
HMGB1P09429 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.8□□□□□ -1.16
HMGB1P09429 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.8□□□□□ -1.16
HMGB1P09429 TNPO1P2-201ENST00000426249 2665 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
HMGB1P09429 AC007382.1-201ENST00000624376 2618 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
HMGB1P09429 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.8□□□□□ -1.16
HMGB1P09429 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
HMGB1P09429 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
HMGB1P09429 AC019178.1-201ENST00000392337 440 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 AC233289.1-201ENST00000403700 508 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 RNA5SP231-201ENST00000410496 138 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.8□□□□□ -1.16
HMGB1P09429 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.8□□□□□ -1.16
HMGB1P09429 SLAMF6P1-201ENST00000451067 602 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 RN7SKP198-201ENST00000459286 306 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 AC089999.1-201ENST00000460336 374 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 RN7SL37P-201ENST00000490461 307 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.8□□□□□ -1.16
HMGB1P09429 SCARNA11.1-201ENST00000516918 132 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.8□□□□□ -1.16
HMGB1P09429 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.8□□□□□ -1.16
HMGB1P09429 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.8□□□□□ -1.16
HMGB1P09429 AC068305.2-201ENST00000550567 1205 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.8□□□□□ -1.16
HMGB1P09429 AL731537.2-201ENST00000561565 951 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 MIR4301-201ENST00000577203 66 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 SS18L2P2-201ENST00000583960 235 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.8□□□□□ -1.16
HMGB1P09429 AL683813.2-201ENST00000605245 502 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 AC242628.1-201ENST00000606810 391 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 AL163152.1-201ENST00000642001 374 ntBASIC7.8□□□□□ -1.16
HMGB1P09429 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.8□□□□□ -1.16
HMGB1P09429 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.8□□□□□ -1.16
HMGB1P09429 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
HMGB1P09429 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
HMGB1P09429 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HMGB1P09429 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HMGB1P09429 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HMGB1P09429 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.79□□□□□ -1.16
HMGB1P09429 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HMGB1P09429 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
HMGB1P09429 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HMGB1P09429 AC079298.1-201ENST00000625026 1619 ntBASIC7.79□□□□□ -1.16
HMGB1P09429 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HMGB1P09429 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.79□□□□□ -1.16
HMGB1P09429 U3.23-201ENST00000391132 200 ntBASIC7.79□□□□□ -1.16
HMGB1P09429 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HMGB1P09429 AC026310.1-201ENST00000396004 378 ntBASIC7.79□□□□□ -1.16
HMGB1P09429 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC7.79□□□□□ -1.16
HMGB1P09429 MTND4LP17-201ENST00000414607 293 ntBASIC7.79□□□□□ -1.16
HMGB1P09429 MEAF6P1-201ENST00000416092 327 ntBASIC7.79□□□□□ -1.16
HMGB1P09429 PTPN2P1-201ENST00000423212 1072 ntBASIC7.79□□□□□ -1.16
HMGB1P09429 DPY19L1P2-201ENST00000426647 915 ntBASIC7.79□□□□□ -1.16
HMGB1P09429 AC092646.1-201ENST00000427142 901 ntBASIC7.79□□□□□ -1.16
HMGB1P09429 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.79□□□□□ -1.16
HMGB1P09429 GAPDHP33-201ENST00000443168 1013 ntBASIC7.79□□□□□ -1.16
HMGB1P09429 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms