Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 RNA5SP333-201ENST00000363466 118 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 RNA5SP510-201ENST00000364697 99 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 RNA5SP334-201ENST00000364825 118 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 LYPLA1P3-201ENST00000402650 695 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 RPL12P12-201ENST00000424633 501 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 NAP1L4P2-201ENST00000425958 899 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 AP000547.1-201ENST00000454360 617 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 AC147055.1-201ENST00000509261 750 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 AC100767.2-201ENST00000604840 693 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 AL645933.2-201ENST00000606743 1207 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 AC108673.3-201ENST00000609183 335 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 AC048344.4-201ENST00000619744 527 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 AC096708.4-201ENST00000620563 552 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 AC026124.2-201ENST00000621847 656 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 OR7A1P-202ENST00000641542 1158 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 MAPK10-365ENST00000641902 3825 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 AL731556.1-201ENST00000394628 3711 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 AC092821.2-201ENST00000545710 2042 ntBASIC7.28□□□□□ -1.24
HLA-DOAP06340 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 RNFT1P3-201ENST00000340898 1052 ntBASIC7.28□□□□□ -1.24
HLA-DOAP06340 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 CDY8P-201ENST00000428380 1279 ntBASIC7.28□□□□□ -1.24
HLA-DOAP06340 CDY20P-201ENST00000447528 1279 ntBASIC7.28□□□□□ -1.24
HLA-DOAP06340 SUMO2P10-201ENST00000452006 288 ntBASIC7.28□□□□□ -1.24
HLA-DOAP06340 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 Y_RNA.667-201ENST00000516212 107 ntBASIC7.28□□□□□ -1.24
HLA-DOAP06340 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 AC126365.2-201ENST00000580630 379 ntBASIC7.28□□□□□ -1.24
HLA-DOAP06340 AP005119.1-201ENST00000580956 292 ntBASIC7.28□□□□□ -1.24
HLA-DOAP06340 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 AL445649.1-201ENST00000615941 691 ntBASIC7.28□□□□□ -1.24
HLA-DOAP06340 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-DOAP06340 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
HLA-DOAP06340 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.24
HLA-DOAP06340 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-DOAP06340 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-DOAP06340 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-DOAP06340 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-DOAP06340 RNA5SP273-201ENST00000362484 113 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms