Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RN7SKP77-201ENST00000363261 353 ntBASIC6.64□□□□□ -1.35
VTNP04004 RN7SKP81-201ENST00000365603 331 ntBASIC6.64□□□□□ -1.35
VTNP04004 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
VTNP04004 SNORA17A-201ENST00000391185 133 ntBASIC6.64□□□□□ -1.35
VTNP04004 AL512422.1-201ENST00000407033 553 ntBASIC6.64□□□□□ -1.35
VTNP04004 AL035660.1-201ENST00000422041 222 ntBASIC6.64□□□□□ -1.35
VTNP04004 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.64□□□□□ -1.35
VTNP04004 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.64□□□□□ -1.35
VTNP04004 AL355355.1-201ENST00000442900 793 ntBASIC6.64□□□□□ -1.35
VTNP04004 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.64□□□□□ -1.35
VTNP04004 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.64□□□□□ -1.35
VTNP04004 GEMIN2P1-201ENST00000454246 752 ntBASIC6.64□□□□□ -1.35
VTNP04004 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VTNP04004 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VTNP04004 OR6M2P-201ENST00000529831 871 ntBASIC6.64□□□□□ -1.35
VTNP04004 PCNAP4-201ENST00000532690 730 ntBASIC6.64□□□□□ -1.35
VTNP04004 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.64□□□□□ -1.35
VTNP04004 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.64□□□□□ -1.35
VTNP04004 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.64□□□□□ -1.35
VTNP04004 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.64□□□□□ -1.35
VTNP04004 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.64□□□□□ -1.35
VTNP04004 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.64□□□□□ -1.35
VTNP04004 AC127024.6-201ENST00000621598 424 ntBASIC6.64□□□□□ -1.35
VTNP04004 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.64□□□□□ -1.35
VTNP04004 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.64□□□□□ -1.35
VTNP04004 SNORA17.5-201ENST00000630429 132 ntBASIC6.64□□□□□ -1.35
VTNP04004 AC119674.1-213ENST00000641177 1386 ntBASIC6.64□□□□□ -1.35
VTNP04004 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTNP04004 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VTNP04004 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VTNP04004 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.64□□□□□ -1.35
VTNP04004 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VTNP04004 AC027088.4-201ENST00000611559 1947 ntBASIC6.64□□□□□ -1.35
VTNP04004 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTNP04004 TMEM75-201ENST00000624314 2165 ntBASIC6.64□□□□□ -1.35
VTNP04004 LINC01616-201ENST00000561816 2280 ntBASIC6.64□□□□□ -1.35
VTNP04004 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.64□□□□□ -1.35
VTNP04004 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
VTNP04004 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.63□□□□□ -1.35
VTNP04004 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTNP04004 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTNP04004 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VTNP04004 DOCK11P1-201ENST00000553480 5932 ntBASIC6.63□□□□□ -1.35
VTNP04004 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
VTNP04004 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.63□□□□□ -1.35
VTNP04004 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VTNP04004 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VTNP04004 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
VTNP04004 RN7SKP161-201ENST00000411110 305 ntBASIC6.63□□□□□ -1.35
VTNP04004 AC245060.4-201ENST00000413293 1121 ntBASIC6.63□□□□□ -1.35
VTNP04004 NMD3P2-201ENST00000421815 761 ntBASIC6.63□□□□□ -1.35
VTNP04004 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VTNP04004 AL512637.1-201ENST00000439523 1231 ntBASIC6.63□□□□□ -1.35
VTNP04004 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.63□□□□□ -1.35
VTNP04004 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.63□□□□□ -1.35
VTNP04004 BMS1P10-201ENST00000443754 1120 ntBASIC6.63□□□□□ -1.35
VTNP04004 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.63□□□□□ -1.35
VTNP04004 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.63□□□□□ -1.35
VTNP04004 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.63□□□□□ -1.35
VTNP04004 AC083795.1-201ENST00000491760 320 ntBASIC6.63□□□□□ -1.35
VTNP04004 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VTNP04004 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.63□□□□□ -1.35
VTNP04004 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.63□□□□□ -1.35
VTNP04004 AC110056.1-201ENST00000525759 911 ntBASIC6.63□□□□□ -1.35
VTNP04004 AC027544.3-201ENST00000535082 757 ntBASIC6.63□□□□□ -1.35
VTNP04004 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.63□□□□□ -1.35
VTNP04004 OR4H6P-201ENST00000563771 921 ntBASIC6.63□□□□□ -1.35
VTNP04004 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTNP04004 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.63□□□□□ -1.35
VTNP04004 AC091193.1-201ENST00000604640 448 ntBASIC6.63□□□□□ -1.35
VTNP04004 AL137246.1-201ENST00000607072 977 ntBASIC6.63□□□□□ -1.35
VTNP04004 AL357153.4-201ENST00000620487 1016 ntBASIC6.63□□□□□ -1.35
VTNP04004 AC092692.1-201ENST00000623625 2595 ntBASIC6.63□□□□□ -1.35
VTNP04004 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.63□□□□□ -1.35
VTNP04004 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.63□□□□□ -1.35
VTNP04004 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VTNP04004 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTNP04004 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTNP04004 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.62□□□□□ -1.35
VTNP04004 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.62□□□□□ -1.35
VTNP04004 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.62□□□□□ -1.35
VTNP04004 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTNP04004 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.62□□□□□ -1.35
VTNP04004 NEPNP-201ENST00000404786 1371 ntBASIC6.62□□□□□ -1.35
VTNP04004 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
VTNP04004 RN7SKP292-201ENST00000365522 317 ntBASIC6.62□□□□□ -1.35
VTNP04004 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
VTNP04004 AC087752.1-201ENST00000391360 558 ntBASIC6.62□□□□□ -1.35
VTNP04004 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.62□□□□□ -1.35
VTNP04004 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.62□□□□□ -1.35
VTNP04004 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.62□□□□□ -1.35
VTNP04004 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.62□□□□□ -1.35
VTNP04004 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.62□□□□□ -1.35
VTNP04004 AL161636.2-201ENST00000445179 927 ntBASIC6.62□□□□□ -1.35
VTNP04004 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.62□□□□□ -1.35
VTNP04004 RPL36AP39-201ENST00000445859 318 ntBASIC6.62□□□□□ -1.35
VTNP04004 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.62□□□□□ -1.35
VTNP04004 AC023245.1-201ENST00000468501 517 ntBASIC6.62□□□□□ -1.35
VTNP04004 AL122020.1-201ENST00000472287 459 ntBASIC6.62□□□□□ -1.35
VTNP04004 RN7SL174P-201ENST00000475578 289 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms