Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.38□□□□□ -1.39
CNOT4O95628 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 AL133320.1-201ENST00000621423 2352 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CNOT4O95628 MAPK10-261ENST00000641050 3109 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 BIN2P1-201ENST00000504996 1530 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CNOT4O95628 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CNOT4O95628 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 RNU6-192P-201ENST00000391253 100 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AL451061.1-201ENST00000407887 862 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.37□□□□□ -1.39
CNOT4O95628 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 RN7SKP85-201ENST00000411349 318 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 BTF3L4P1-201ENST00000413813 468 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC009500.1-201ENST00000420684 583 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC114928.1-201ENST00000446516 415 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC009244.1-201ENST00000450566 258 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 RBMY2TP-201ENST00000451162 947 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 RN7SL325P-201ENST00000460434 283 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AC026336.1-201ENST00000466577 351 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 RN7SL705P-201ENST00000481678 294 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 RN7SL267P-201ENST00000485107 261 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AC066616.1-201ENST00000486795 413 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 RPS3AP22-201ENST00000488297 769 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 OR5H3P-201ENST00000502817 919 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 MTCO1P31-201ENST00000506355 492 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.37□□□□□ -1.39
CNOT4O95628 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.37□□□□□ -1.39
CNOT4O95628 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC010306.1-201ENST00000523223 1117 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 OR4A17P-201ENST00000526032 904 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC023050.2-201ENST00000544968 387 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC013283.1-201ENST00000557282 492 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 NDUFA3P4-201ENST00000560814 250 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.37□□□□□ -1.39
CNOT4O95628 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.37□□□□□ -1.39
CNOT4O95628 DHFRP1-201ENST00000579682 559 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC124283.4-201ENST00000581815 456 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 MIR4470-201ENST00000583453 72 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC015801.1-201ENST00000585651 153 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 DEFB131E-202ENST00000602581 683 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 MRPS35P3-201ENST00000603189 709 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AC073387.2-201ENST00000604797 784 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AL355333.1-201ENST00000605632 279 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AC015849.2-201ENST00000605738 409 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 U91328.4-201ENST00000608919 517 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 AL121809.2-201ENST00000613169 341 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.37□□□□□ -1.39
CNOT4O95628 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.37□□□□□ -1.39
CNOT4O95628 AC090897.3-201ENST00000636973 1157 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 OR8B1P-202ENST00000641132 1178 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNOT4O95628 AC016251.2-201ENST00000623393 3089 ntBASIC6.37□□□□□ -1.39
CNOT4O95628 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms