Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC8.77□□□□□ -1.01
RNF40O75150 RPL39P36-201ENST00000490784 156 ntBASIC8.77□□□□□ -1.01
RNF40O75150 EIF3LP3-201ENST00000495197 822 ntBASIC8.77□□□□□ -1.01
RNF40O75150 AC112225.1-201ENST00000508230 297 ntBASIC8.77□□□□□ -1.01
RNF40O75150 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC8.77□□□□□ -1.01
RNF40O75150 RNU6-430P-201ENST00000517078 107 ntBASIC8.77□□□□□ -1.01
RNF40O75150 PSAT1P1-201ENST00000518968 1106 ntBASIC8.77□□□□□ -1.01
RNF40O75150 PIGFP1-201ENST00000519180 653 ntBASIC8.77□□□□□ -1.01
RNF40O75150 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC8.77□□□□□ -1.01
RNF40O75150 MTND1P35-201ENST00000526739 508 ntBASIC8.77□□□□□ -1.01
RNF40O75150 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC8.77□□□□□ -1.01
RNF40O75150 NACA-211ENST00000548563 827 ntTSL 5 BASIC8.77□□□□□ -1.01
RNF40O75150 AC144548.1-201ENST00000549577 324 ntBASIC8.77□□□□□ -1.01
RNF40O75150 AC078814.3-201ENST00000553036 491 ntBASIC8.77□□□□□ -1.01
RNF40O75150 PCMTD1P2-201ENST00000565017 355 ntBASIC8.77□□□□□ -1.01
RNF40O75150 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC8.77□□□□□ -1.01
RNF40O75150 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC8.77□□□□□ -1.01
RNF40O75150 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.77□□□□□ -1.01
RNF40O75150 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.77□□□□□ -1.01
RNF40O75150 AC005962.2-201ENST00000611427 652 ntBASIC8.77□□□□□ -1.01
RNF40O75150 AC110769.3-201ENST00000624567 1173 ntBASIC8.77□□□□□ -1.01
RNF40O75150 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.77□□□□□ -1.01
RNF40O75150 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RNF40O75150 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RNF40O75150 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RNF40O75150 MAPK10-290ENST00000641237 2826 ntBASIC8.77□□□□□ -1.01
RNF40O75150 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
RNF40O75150 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RNF40O75150 MAPK10-313ENST00000641405 2469 ntBASIC8.77□□□□□ -1.01
RNF40O75150 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RNF40O75150 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
RNF40O75150 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RNF40O75150 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
RNF40O75150 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RNF40O75150 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.77□□□□□ -1.01
RNF40O75150 AC138393.1-206ENST00000540997 1886 ntBASIC8.77□□□□□ -1.01
RNF40O75150 ZNF736P3Y-201ENST00000428264 1465 ntBASIC8.77□□□□□ -1.01
RNF40O75150 AC092162.3-201ENST00000624511 1624 ntBASIC8.76□□□□□ -1.01
RNF40O75150 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 AL359922.2-201ENST00000581788 3017 ntBASIC8.76□□□□□ -1.01
RNF40O75150 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 AC008555.1-201ENST00000561778 2757 ntBASIC8.76□□□□□ -1.01
RNF40O75150 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.76□□□□□ -1.01
RNF40O75150 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
RNF40O75150 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
RNF40O75150 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
RNF40O75150 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC8.76□□□□□ -1.01
RNF40O75150 RNU6-501P-201ENST00000364072 100 ntBASIC8.76□□□□□ -1.01
RNF40O75150 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC8.76□□□□□ -1.01
RNF40O75150 RNU6-877P-201ENST00000383868 107 ntBASIC8.76□□□□□ -1.01
RNF40O75150 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
RNF40O75150 RNA5SP221-201ENST00000411271 103 ntBASIC8.76□□□□□ -1.01
RNF40O75150 USP9YP27-201ENST00000418455 438 ntBASIC8.76□□□□□ -1.01
RNF40O75150 RPL7P44-201ENST00000424827 742 ntBASIC8.76□□□□□ -1.01
RNF40O75150 AL357632.1-201ENST00000426688 643 ntBASIC8.76□□□□□ -1.01
RNF40O75150 NANOGP4-201ENST00000427230 913 ntBASIC8.76□□□□□ -1.01
RNF40O75150 MTCO1P3-201ENST00000429327 192 ntBASIC8.76□□□□□ -1.01
RNF40O75150 AC108448.2-201ENST00000431546 730 ntBASIC8.76□□□□□ -1.01
RNF40O75150 FTH1P20-201ENST00000434913 548 ntBASIC8.76□□□□□ -1.01
RNF40O75150 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.76□□□□□ -1.01
RNF40O75150 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
RNF40O75150 AC242426.2-201ENST00000446956 795 ntBASIC8.76□□□□□ -1.01
RNF40O75150 RPL4P2-201ENST00000447259 1282 ntBASIC8.76□□□□□ -1.01
RNF40O75150 CEACAMP5-201ENST00000448037 961 ntBASIC8.76□□□□□ -1.01
RNF40O75150 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC8.76□□□□□ -1.01
RNF40O75150 RPL5P17-201ENST00000469685 877 ntBASIC8.76□□□□□ -1.01
RNF40O75150 RPS3P7-201ENST00000488662 726 ntBASIC8.76□□□□□ -1.01
RNF40O75150 CCDC34P1-201ENST00000507441 517 ntBASIC8.76□□□□□ -1.01
RNF40O75150 AF186996.2-201ENST00000508347 907 ntBASIC8.76□□□□□ -1.01
RNF40O75150 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.76□□□□□ -1.01
RNF40O75150 MTCO1P30-201ENST00000515244 580 ntBASIC8.76□□□□□ -1.01
RNF40O75150 RNU6-123P-201ENST00000516163 102 ntBASIC8.76□□□□□ -1.01
RNF40O75150 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC8.76□□□□□ -1.01
RNF40O75150 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.76□□□□□ -1.01
RNF40O75150 OR11J5P-201ENST00000556889 934 ntBASIC8.76□□□□□ -1.01
RNF40O75150 ANP32BP1-202ENST00000568553 737 ntBASIC8.76□□□□□ -1.01
RNF40O75150 AC090826.1-203ENST00000569235 490 ntBASIC8.76□□□□□ -1.01
RNF40O75150 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC8.76□□□□□ -1.01
RNF40O75150 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC8.76□□□□□ -1.01
RNF40O75150 RPL10P15-201ENST00000585756 315 ntBASIC8.76□□□□□ -1.01
RNF40O75150 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC8.76□□□□□ -1.01
RNF40O75150 AC006006.1-201ENST00000603082 144 ntBASIC8.76□□□□□ -1.01
RNF40O75150 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC8.76□□□□□ -1.01
RNF40O75150 SUMO2P14-201ENST00000604488 293 ntBASIC8.76□□□□□ -1.01
RNF40O75150 AC024560.3-201ENST00000608482 349 ntBASIC8.76□□□□□ -1.01
RNF40O75150 AL136295.6-201ENST00000610486 658 ntBASIC8.76□□□□□ -1.01
RNF40O75150 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC8.76□□□□□ -1.01
RNF40O75150 AC127070.5-201ENST00000623177 2104 ntBASIC8.76□□□□□ -1.01
RNF40O75150 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.76□□□□□ -1.01
RNF40O75150 AC073488.5-201ENST00000631993 754 ntBASIC8.76□□□□□ -1.01
RNF40O75150 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 AC073324.1-201ENST00000425993 1435 ntBASIC8.76□□□□□ -1.01
RNF40O75150 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 CDY15P-201ENST00000421995 1570 ntBASIC8.76□□□□□ -1.01
RNF40O75150 CDY22P-201ENST00000451423 1554 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms