Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 LCOR-201ENST00000286067 4542 ntBASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC187A0A096LP49 AC023245.2-201ENST00000530760 2978 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 HSPD1P9-201ENST00000420325 1636 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC093225.1-201ENST00000506867 1408 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC023490.2-201ENST00000359859 470 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 MIR199B-201ENST00000384849 110 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 ARAFP1-201ENST00000422172 605 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 IPPKP1-201ENST00000422501 768 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC097463.1-201ENST00000447288 481 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 EIF2S2P4-201ENST00000461070 984 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 RPL12P30-201ENST00000488389 499 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 RPL7P51-201ENST00000490532 749 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC104109.1-201ENST00000498563 436 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 MTND6P8-201ENST00000503471 522 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC138409.2-202ENST00000507274 458 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC096754.1-201ENST00000508904 818 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC011411.1-201ENST00000509592 876 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 OR5D2P-201ENST00000524390 911 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AP003102.1-201ENST00000525638 661 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 CYCSP38-201ENST00000559840 322 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC018558.5-201ENST00000565840 952 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC012146.2-201ENST00000576545 416 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AL356986.1-201ENST00000604085 341 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 SNX18P12-201ENST00000624821 759 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 MIR4302-201ENST00000638058 60 ntBASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC187A0A096LP49 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 AC083806.2-201ENST00000617795 2685 ntBASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC187A0A096LP49 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms