Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AL161912.4-201ENST00000623889 2468 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AL157702.1-201ENST00000398764 426 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 RN7SKP121-201ENST00000410842 305 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC099782.1-201ENST00000425889 474 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 IGLV3-4-201ENST00000432300 244 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 USP24P1-201ENST00000433802 779 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AL590399.4-201ENST00000436561 601 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 RPS27AP3-201ENST00000453803 454 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 RANP2-201ENST00000456833 229 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 RPS27P20-201ENST00000492051 246 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC008945.1-201ENST00000505144 499 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 HMGN1P16-201ENST00000508308 283 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 RNA5SP400-201ENST00000517155 111 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AP001000.1-201ENST00000526843 742 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 RPA2P3-201ENST00000533268 770 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC005632.2-201ENST00000564271 828 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 DYNLL1P1-201ENST00000595442 269 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC116667.2-201ENST00000641075 823 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 CAP1P2-201ENST00000417455 1409 ntBASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAPPC4Q9Y296 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AC018628.1-201ENST00000624147 3819 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 RPL11P4-201ENST00000332269 436 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AC121334.1-201ENST00000396414 802 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AL445238.1-204ENST00000400311 463 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 MTND2P12-201ENST00000417560 1252 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 RPL7AP51-201ENST00000422016 760 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 VN1R20P-201ENST00000425215 966 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AC094019.1-201ENST00000434678 472 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 PPIAP10-201ENST00000438675 458 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AC098818.1-201ENST00000478593 252 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 OR7A8P-201ENST00000595427 913 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AC011500.1-201ENST00000601963 469 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 WBP1LP12-201ENST00000604449 331 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms