Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 AC233724.10-201ENST00000510454 409 ntBASIC10.42□□□□□ -0.74
PHF8Q9UPP1 RNU6-943P-201ENST00000516960 98 ntBASIC10.42□□□□□ -0.74
PHF8Q9UPP1 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 SERPINA15P-201ENST00000529287 266 ntBASIC10.42□□□□□ -0.74
PHF8Q9UPP1 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 SKA2-203ENST00000578105 689 ntTSL 2 BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 AC008121.3-201ENST00000618726 433 ntBASIC10.42□□□□□ -0.74
PHF8Q9UPP1 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PHF8Q9UPP1 AL353898.3-201ENST00000624679 1755 ntBASIC10.42□□□□□ -0.74
PHF8Q9UPP1 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 RN7SKP184-201ENST00000362348 333 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 RN7SKP36-201ENST00000363997 312 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 Y_RNA.402-201ENST00000383972 102 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 GSTA10P-201ENST00000412182 576 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 ARMC4P1-201ENST00000438905 707 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 USP9YP15-201ENST00000442391 422 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 RN7SL267P-201ENST00000485107 261 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC008868.1-201ENST00000509786 737 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC079395.1-201ENST00000510981 262 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 OR5AQ1P-201ENST00000527596 927 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AP002453.2-201ENST00000533503 320 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AL591848.3-201ENST00000570141 2968 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 RN7SL835P-201ENST00000579920 262 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC068790.7-201ENST00000602347 528 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 RN7SL536P-201ENST00000612366 290 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 RN7SL545P-201ENST00000620547 290 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 RN7SL759P-201ENST00000620768 290 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AL139254.2-202ENST00000641937 1156 ntBASIC10.41□□□□□ -0.74
PHF8Q9UPP1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC10.41□□□□□ -0.74
PHF8Q9UPP1 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 ERG-206ENST00000398911 4914 ntTSL 5 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 VTRNA1-2-201ENST00000365241 89 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 MIR555-201ENST00000384987 96 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 RPS3AP5-201ENST00000389400 821 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 RNU6-332P-201ENST00000391193 108 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AC007390.1-201ENST00000415722 356 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 1950.2 ms