Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL157884.1-201ENST00000424561 454 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 SOCS5P1-201ENST00000440415 949 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 RBBP4P1-201ENST00000502424 1276 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 Y_RNA.667-201ENST00000516212 107 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AC036111.2-201ENST00000533247 901 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AC012146.2-201ENST00000576545 416 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AC092646.2-201ENST00000431242 2095 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AC091305.2-201ENST00000624049 1576 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 RN7SKP15-201ENST00000364742 309 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 RPL35AP3-201ENST00000414680 288 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 RPL21P50-201ENST00000417698 477 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 DNAJA1P5-201ENST00000440278 943 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 CUBNP2-201ENST00000443534 1139 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AC079315.1-201ENST00000602952 623 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC88CQ9P219 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.82□□□□□ -1.48
CCDC88CQ9P219 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 RPL7AP14-201ENST00000424041 802 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AL359839.1-201ENST00000451975 1160 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC103563.5-201ENST00000455643 364 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 SLC25A51P1-201ENST00000468432 871 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 UGT2A3P7-201ENST00000510485 734 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 TRIM51DP-201ENST00000529746 596 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC108865.2-201ENST00000606881 432 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC096861.1-201ENST00000616652 240 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AL136228.1-201ENST00000622221 319 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC127024.8-201ENST00000623719 2094 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 EIF3EP1-201ENST00000433978 1316 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 RNA5SP206-201ENST00000516703 121 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC090236.2-201ENST00000587933 1101 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC024255.1-201ENST00000614376 102 ntBASIC5.81□□□□□ -1.48
CCDC88CQ9P219 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC88CQ9P219 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 AL731532.1-201ENST00000623972 4236 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 PSG10P-201ENST00000501199 1500 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms