Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
COL20A1Q9P218 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AC024587.1-201ENST00000505925 2157 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AP001541.1-201ENST00000623322 1904 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 MIR433-201ENST00000384837 93 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 AL589655.1-201ENST00000405398 482 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 KIF4CP-201ENST00000422742 1279 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 CR848007.2-201ENST00000424918 787 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 MTND4P15-201ENST00000437913 1033 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 AL512593.1-201ENST00000444758 779 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 OR2A3P-201ENST00000493774 953 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 PRMT5P1-201ENST00000514351 598 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 EIF4A2P3-201ENST00000525903 1055 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 RNU4ATAC-201ENST00000580972 127 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 NPM1P45-201ENST00000583151 559 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AC108673.3-201ENST00000609183 335 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 AL096712.1-201ENST00000614561 159 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 AC129915.3-201ENST00000634128 948 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
COL20A1Q9P218 CDY5P-201ENST00000411487 1580 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 CDY9P-201ENST00000451397 1580 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 AC091305.2-201ENST00000624049 1576 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 AP004289.1-201ENST00000436307 2205 ntBASIC7.03□□□□□ -1.28
COL20A1Q9P218 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL20A1Q9P218 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.02□□□□□ -1.28
COL20A1Q9P218 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL20A1Q9P218 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL20A1Q9P218 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL20A1Q9P218 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL20A1Q9P218 TMSB4XP2-201ENST00000335179 210 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL20A1Q9P218 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 AL607077.1-201ENST00000401718 499 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 RNA5SP156-201ENST00000410250 110 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 AC245096.1-201ENST00000413104 546 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 MTND4LP21-201ENST00000415303 295 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 NAP1L4P2-201ENST00000425958 899 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 MTCO3P43-201ENST00000440974 771 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 SEPT14P12-201ENST00000442280 560 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 ZNF619P1-201ENST00000446539 752 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 FTLP8-201ENST00000446770 267 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 RNU7-157P-201ENST00000459600 66 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 AC084754.1-201ENST00000463466 464 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 AC090589.1-201ENST00000473109 362 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 Y_RNA.667-201ENST00000516212 107 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 AC060775.1-201ENST00000518241 520 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 MTND1P36-201ENST00000522384 936 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 MIR6809-201ENST00000612189 116 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL20A1Q9P218 AL162233.1-201ENST00000620014 944 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 AL136228.1-201ENST00000622221 319 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 AL138960.2-201ENST00000625145 535 ntBASIC7.02□□□□□ -1.29
COL20A1Q9P218 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
COL20A1Q9P218 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL20A1Q9P218 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL20A1Q9P218 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms