Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 Z93930.3-201ENST00000607919 749 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 uc_338.26-201ENST00000612659 160 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC069542.2-201ENST00000624816 216 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 SNX18P12-201ENST00000624821 759 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AL161912.4-201ENST00000623889 2468 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 RPL11P4-201ENST00000332269 436 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 RN7SKP128-201ENST00000364270 303 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 RNA5SP485-201ENST00000365053 119 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 MIR431-201ENST00000385266 114 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 RNU11-201ENST00000387069 134 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AL360013.1-201ENST00000419031 858 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AP003385.3-201ENST00000472498 287 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 RPS7P11-201ENST00000484240 586 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AC093815.1-201ENST00000508637 280 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AC136777.2-201ENST00000522979 358 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 NATP-201ENST00000523491 878 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AC124891.1-201ENST00000536322 519 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AC027796.1-201ENST00000575593 512 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AL360012.1-201ENST00000602813 131 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 MIR6811-201ENST00000620409 58 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AC016542.2-201ENST00000624201 619 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 CLUHP10-201ENST00000631979 980 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 AL592429.1-201ENST00000403909 1473 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.69□□□□□ -1.5
VAPAQ9P0L0 THAP12P9-201ENST00000503971 2360 ntBASIC5.69□□□□□ -1.5
VAPAQ9P0L0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 MTND5P12-201ENST00000502851 1449 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC022325.1-201ENST00000502748 2199 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 SNORD94-201ENST00000386037 137 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 ARSFP1-201ENST00000398758 477 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AL096829.1-201ENST00000413677 457 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms