Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 AL512310.3-201ENST00000547023 1335 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 AL929601.4-201ENST00000613011 1341 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 RN7SKP107-201ENST00000364157 290 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 AL590084.2-201ENST00000401481 382 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 GAPDHP55-201ENST00000423136 803 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 UQCRHP1-204ENST00000424609 274 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 MTCYBP42-201ENST00000444653 1130 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 AL606662.1-201ENST00000445763 553 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 CDC42P2-201ENST00000448566 569 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC007000.1-201ENST00000453064 794 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 MRPL42P4-201ENST00000453267 443 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 RPL10P6-201ENST00000457497 318 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 GAPDHP31-201ENST00000509325 1014 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC021146.7-201ENST00000509604 775 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 LINC01085-203ENST00000511195 326 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 IGHVII-22-1-201ENST00000517888 265 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 IGLV1-62-201ENST00000518003 441 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 NDUFA5P2-201ENST00000519723 344 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 BTG1P1-201ENST00000540396 508 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AKIRIN1P1-201ENST00000547384 544 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 DUXAP1-201ENST00000556632 463 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC009171.1-201ENST00000572673 266 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 RN7SL42P-201ENST00000579786 294 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 MIR3611-201ENST00000584484 83 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC091135.1-201ENST00000585943 307 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC010719.1-201ENST00000602992 747 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 CLPTM1LP1-201ENST00000604519 484 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AL353621.2-201ENST00000605340 133 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC080013.4-201ENST00000607624 649 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC005021.1-201ENST00000608730 355 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AL022324.3-201ENST00000609330 747 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AL121809.2-201ENST00000613169 341 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 OR1S1-201ENST00000624470 978 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 RPL36AP21-202ENST00000639134 430 ntBASIC7.12□□□□□ -1.27
SSU72Q9NP77 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SSU72Q9NP77 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSU72Q9NP77 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSU72Q9NP77 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 KYNUP1-201ENST00000466683 1406 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSU72Q9NP77 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSU72Q9NP77 AC074198.1-201ENST00000506546 1397 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 AC130456.1-201ENST00000565085 1363 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSU72Q9NP77 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 AC119674.1-204ENST00000641348 1343 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSU72Q9NP77 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSU72Q9NP77 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 FAM3C2-201ENST00000312214 681 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 RPL10P16-201ENST00000325000 645 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSU72Q9NP77 Y_RNA.6-201ENST00000362350 114 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 RNA5SP263-201ENST00000363376 128 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSU72Q9NP77 AL391422.1-201ENST00000402155 436 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 AL713922.1-201ENST00000416477 747 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 AC098592.1-201ENST00000419352 333 ntBASIC7.11□□□□□ -1.27
SSU72Q9NP77 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.11□□□□□ -1.27
SSU72Q9NP77 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms