Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AC092865.1-201ENST00000544395 1023 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AC005632.2-201ENST00000564271 828 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 SNORD1C-201ENST00000363315 78 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 RNU1-49P-201ENST00000363468 159 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AC094019.1-201ENST00000434678 472 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 RN7SL552P-201ENST00000462094 276 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AC005017.1-201ENST00000482002 490 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 RN7SL568P-201ENST00000493069 298 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 RN7SL104P-201ENST00000498686 293 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 SNX18P24-201ENST00000505249 671 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AL049779.3-201ENST00000557141 606 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 MIR3908-201ENST00000579798 126 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AL591167.1-201ENST00000607321 456 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AL352984.2-202ENST00000613699 155 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AL138960.1-201ENST00000613838 513 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 AL118556.2-201ENST00000614375 824 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.34□□□□□ -1.39
PCDH9Q9HC56 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDH9Q9HC56 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AC092651.1-201ENST00000426110 312 ntBASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 LDHAP2-201ENST00000437325 985 ntBASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AC010086.1-201ENST00000437359 1052 ntBASIC6.33□□□□□ -1.4
PCDH9Q9HC56 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms