Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCSER1Q9C0I3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCSER1Q9C0I3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CCSER1Q9C0I3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CCSER1Q9C0I3 SNX18P3-202ENST00000565670 1750 ntBASIC6.82□□□□□ -1.32
CCSER1Q9C0I3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.82□□□□□ -1.32
CCSER1Q9C0I3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.82□□□□□ -1.32
CCSER1Q9C0I3 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.82□□□□□ -1.32
CCSER1Q9C0I3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.82□□□□□ -1.32
CCSER1Q9C0I3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCSER1Q9C0I3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 RNU1-65P-201ENST00000363919 148 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 MYL6P5-201ENST00000412707 459 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 RPL23AP18-201ENST00000416139 468 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC124945.1-201ENST00000485133 188 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AP002453.1-201ENST00000492327 668 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 CCDC11P1-201ENST00000503137 1162 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC108103.1-201ENST00000511286 446 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 HSD3BP3-201ENST00000514706 994 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 RNA5SP441-201ENST00000516809 88 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 OR4A6P-201ENST00000534364 970 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC069234.4-201ENST00000621276 412 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AL357562.1-201ENST00000624911 609 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC073488.6-201ENST00000632293 754 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AL357140.4-201ENST00000636827 412 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC007114.2-201ENST00000576014 4281 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC027575.3-201ENST00000583058 2747 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC034229.2-201ENST00000566945 2508 ntBASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCSER1Q9C0I3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AP003486.1-201ENST00000525716 3994 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 SNORD1C-201ENST00000363315 78 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 GNG5P2-201ENST00000372054 207 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 RPL12P12-201ENST00000424633 501 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 CUBNP2-201ENST00000443534 1139 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 TRIM60P16-201ENST00000444048 694 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AC016027.4-201ENST00000450866 277 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 SDC4P-201ENST00000453285 601 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AC104339.1-201ENST00000465478 348 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 Vault.2-201ENST00000516519 98 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 MRPS21P8-201ENST00000569196 235 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AL645933.2-201ENST00000606743 1207 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AL136097.3-201ENST00000611097 505 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 RFPL4AP6-201ENST00000616792 846 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AL355974.3-201ENST00000617383 467 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 AL512652.1-201ENST00000619006 500 ntBASIC6.8□□□□□ -1.32
CCSER1Q9C0I3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms