Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.2□□□□□ -1.26
FOXP3Q9BZS1 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
FOXP3Q9BZS1 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.2□□□□□ -1.26
FOXP3Q9BZS1 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.2□□□□□ -1.26
FOXP3Q9BZS1 AC127070.3-201ENST00000503695 3263 ntBASIC7.2□□□□□ -1.26
FOXP3Q9BZS1 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
FOXP3Q9BZS1 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
FOXP3Q9BZS1 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
FOXP3Q9BZS1 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 RPL9P21-201ENST00000392269 505 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 RN7SKP254-201ENST00000410685 310 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 RANP4-201ENST00000413361 655 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AL662791.3-201ENST00000413771 776 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 MTCO1P45-201ENST00000431457 267 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 CHCHD4P5-201ENST00000436684 427 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AC079781.1-201ENST00000441505 394 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AL133480.2-201ENST00000456723 487 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AC126615.1-201ENST00000470084 630 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AC096743.1-201ENST00000485172 319 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 RPL21P131-201ENST00000497298 483 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 RN7SL775P-201ENST00000498361 336 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 CHCHD2P7-201ENST00000508008 452 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AL360219.1-201ENST00000610230 366 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 PART1_2.1-201ENST00000612397 250 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 AP005139.1-201ENST00000580702 1647 ntBASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
FOXP3Q9BZS1 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AC005034.3-201ENST00000604845 1747 ntBASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 SNRPEP5-201ENST00000425442 278 ntBASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AC009362.1-201ENST00000427253 406 ntBASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AC093422.3-201ENST00000428506 305 ntBASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AC084290.1-201ENST00000434995 374 ntBASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.18□□□□□ -1.26
FOXP3Q9BZS1 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms