Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 AL121835.1-201ENST00000404250 354 ntBASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 HIGD1AP16-201ENST00000450986 258 ntBASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 RPL7L1P3-201ENST00000455249 689 ntBASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 RN7SL104P-201ENST00000498686 293 ntBASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 HSD3BP3-201ENST00000514706 994 ntBASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 CYCSP25-201ENST00000525280 316 ntBASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 AC012146.2-201ENST00000576545 416 ntBASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
UPF3BQ9BZI7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AL359091.1-201ENST00000449048 1734 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC010329.1-201ENST00000593903 8328 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 RNA5SP375-201ENST00000362975 119 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 PRELID1P1-201ENST00000403549 660 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AL512593.1-201ENST00000444758 779 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 RPL34P33-201ENST00000486062 334 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 RPL7P51-201ENST00000490532 749 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC008555.7-201ENST00000605008 583 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AL359955.1-201ENST00000455242 3275 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC011416.1-201ENST00000514947 1732 ntBASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.3□□□□□ -1.24
UPF3BQ9BZI7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 RNU1-59P-201ENST00000364829 162 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AL731534.1-201ENST00000434711 269 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 BX679664.2-201ENST00000439282 283 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms