Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC087516.1-201ENST00000561236 2428 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AL357752.1-201ENST00000412817 349 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 METTL15P3-201ENST00000415522 1221 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC006335.2-201ENST00000437993 330 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC245047.2-201ENST00000441060 530 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AURKAPS1-201ENST00000451805 1212 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC083795.1-201ENST00000491760 320 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC021146.10-201ENST00000515628 706 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC018552.1-201ENST00000562099 811 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC100827.5-201ENST00000615883 426 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC107398.3-201ENST00000562284 7000 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AL159987.1-201ENST00000347911 293 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 PRUNEP1-201ENST00000425846 705 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC019185.1-201ENST00000442718 389 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 RPL7P61-201ENST00000451721 751 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 RPL7AP6-201ENST00000477943 801 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 RN7SKP66-201ENST00000516681 231 ntBASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AC010478.1-201ENST00000601500 6762 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AOX3P-204ENST00000491025 2107 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 RNA5SP350-201ENST00000363298 111 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AL133173.1-201ENST00000423458 397 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AL450023.1-201ENST00000450868 751 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AL606490.1-201ENST00000452266 765 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 VDAC2P4-201ENST00000452925 711 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 HIGD1AP8-201ENST00000453927 274 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 RN7SL583P-201ENST00000475692 287 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 RN7SL346P-201ENST00000491561 294 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 RPEP1-201ENST00000504507 658 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AC139365.2-201ENST00000517972 253 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AL139099.4-201ENST00000614802 114 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AC008115.4-201ENST00000619780 775 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AC007683.2-201ENST00000624681 714 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 AC127070.3-201ENST00000503695 3263 ntBASIC7.63□□□□□ -1.19
SHANK3Q9BYB0 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 CASC19-248ENST00000641674 1356 ntBASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 GTF2IP4-201ENST00000453092 2054 ntBASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 RPL26P29-201ENST00000415623 438 ntBASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 RN7SL184P-201ENST00000488308 297 ntBASIC7.62□□□□□ -1.19
SHANK3Q9BYB0 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms