Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 BX284613.1-201ENST00000452221 1641 ntBASIC5.56□□□□□ -1.52
RSPO3Q9BXY4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 SNORA21-201ENST00000362423 132 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 PRELID1P1-201ENST00000403549 660 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AL139805.1-201ENST00000407837 289 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AL590399.2-201ENST00000427536 309 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC023141.3-201ENST00000436698 278 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AL390879.1-201ENST00000439143 386 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC245291.3-201ENST00000443400 292 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 CUBNP2-201ENST00000443534 1139 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 RPS7P10-201ENST00000464254 603 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 RN7SL352P-201ENST00000466002 277 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 RPL12P30-201ENST00000488389 499 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC090958.1-201ENST00000511122 351 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 RNA5SP473-201ENST00000516402 125 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC126615.2-201ENST00000553003 515 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 WBP1LP11-201ENST00000586141 328 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC087516.1-201ENST00000561236 2428 ntBASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.55□□□□□ -1.52
RSPO3Q9BXY4 AC079753.1-201ENST00000623243 3868 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 KYNUP3-201ENST00000574386 1341 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 RN7SKP250-201ENST00000363924 321 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 U3.10-201ENST00000364459 214 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 MIR323B-201ENST00000385269 82 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 NPM1P25-201ENST00000429734 854 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 RPL12P16-201ENST00000431098 498 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC073410.1-201ENST00000435125 589 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC007383.1-201ENST00000445875 636 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC097359.1-201ENST00000447946 463 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 RN7SL552P-201ENST00000462094 276 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 RPL38P3-201ENST00000484463 213 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 CR383658.1-201ENST00000514609 734 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms