Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC021146.10-201ENST00000515628 706 ntBASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 HMGN1P26-201ENST00000558737 303 ntBASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 ADAM3B-201ENST00000569937 840 ntBASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AP001267.4-201ENST00000602598 545 ntBASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 RAB28P4-201ENST00000622233 665 ntBASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AL031595.2-201ENST00000624215 19071 ntBASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 AC005005.4-201ENST00000623789 16698 ntBASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRDL1Q9BU40 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AC107021.2-201ENST00000567714 2095 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 U3.52-201ENST00000384034 216 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AL353133.1-201ENST00000407695 401 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 CDC42P6-201ENST00000421246 576 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 CYCSP52-201ENST00000422857 310 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AC079922.1-201ENST00000443291 359 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 CCNJP2-201ENST00000457810 1163 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AL355032.1-201ENST00000472981 438 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 RPL19P11-201ENST00000495944 589 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AC090058.1-201ENST00000498788 435 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 SCARNA5-201ENST00000516201 276 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 RN7SL208P-201ENST00000577964 296 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 RPL29P33-201ENST00000587474 316 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 MIR6070-201ENST00000613967 103 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 RBPJP6-201ENST00000411556 1431 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 AC006484.1-201ENST00000435086 1884 ntBASIC5.05□□□□□ -1.6
CHRDL1Q9BU40 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CHRDL1Q9BU40 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.04□□□□□ -1.6
CHRDL1Q9BU40 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.04□□□□□ -1.6
CHRDL1Q9BU40 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRDL1Q9BU40 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHRDL1Q9BU40 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
CHRDL1Q9BU40 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms