Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AP003385.3-201ENST00000472498 287 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 TDGP1-201ENST00000543961 1229 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 MIR212-201ENST00000586026 110 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AC119403.2-201ENST00000590960 598 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 MIR6811-201ENST00000620409 58 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AL122023.1-201ENST00000622847 530 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AC020656.2-201ENST00000613291 5309 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AC217777.1-201ENST00000570034 1471 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 AC022325.1-201ENST00000502748 2199 ntBASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HDHD3Q9BSH5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC004076.2-201ENST00000620532 3323 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AL161901.1-201ENST00000624954 3425 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 U3.10-201ENST00000364459 214 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 RNU105B-201ENST00000364478 208 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 RN7SKP144-201ENST00000411108 279 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 TRGV5P-201ENST00000419915 354 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 PSMD10P2-201ENST00000432890 672 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 ARMC4P1-201ENST00000438905 707 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 PPIAP32-201ENST00000449940 472 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC002075.1-201ENST00000457396 676 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC114982.2-201ENST00000461396 358 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 RPS7P11-201ENST00000484240 586 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 MTCO1P55-201ENST00000489829 745 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 RNA5SP434-201ENST00000516647 121 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 NATP-201ENST00000523491 878 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AL591222.2-201ENST00000604443 754 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 RPSAP75-201ENST00000605848 301 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms