Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 TCL6_3.1-201ENST00000619064 137 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 AL158062.1-201ENST00000619632 745 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 AC004836.1-201ENST00000623032 634 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 AC009120.2-204ENST00000621548 2032 ntBASIC5.43□□□□□ -1.54
SSX3Q99909 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX3Q99909 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SSX3Q99909 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX3Q99909 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX3Q99909 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SSX3Q99909 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX3Q99909 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 AC096921.2-201ENST00000561507 1916 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SSX3Q99909 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX3Q99909 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX3Q99909 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX3Q99909 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX3Q99909 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
SSX3Q99909 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 AC007842.1-201ENST00000597336 2039 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX3Q99909 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 OR7E25P-201ENST00000344844 931 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 RNA5SP321-201ENST00000362722 111 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 Y_RNA.62-201ENST00000362840 99 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 RNU1-55P-201ENST00000365510 158 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 RNU6-1263P-201ENST00000384601 106 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.42□□□□□ -1.54
SSX3Q99909 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX3Q99909 AC009506.2-201ENST00000420635 840 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX3Q99909 RFESDP1-201ENST00000422350 461 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 RPL12P18-201ENST00000437175 325 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 YRDCP3-201ENST00000456507 480 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.42□□□□□ -1.54
SSX3Q99909 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX3Q99909 AC092349.1-201ENST00000504903 310 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX3Q99909 OR9G2P-201ENST00000533326 880 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.42□□□□□ -1.54
SSX3Q99909 AC090115.2-201ENST00000548060 883 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 DUX4L52-201ENST00000549363 777 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX3Q99909 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 AC091304.4-201ENST00000565703 620 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 RN7SL199P-201ENST00000578752 281 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 RN7SL656P-201ENST00000579044 281 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 RN7SL404P-201ENST00000582421 281 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX3Q99909 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX3Q99909 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX3Q99909 Z95327.3-201ENST00000610385 572 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 MIR7854-201ENST00000620068 65 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX3Q99909 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX3Q99909 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX3Q99909 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 AC007012.2-201ENST00000623206 1676 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 AL022311.1-201ENST00000623726 19416 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 RACGAP1P-201ENST00000550663 1879 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 AC079753.1-201ENST00000623243 3868 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX3Q99909 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX3Q99909 AP000473.2-201ENST00000602659 1537 ntBASIC5.42□□□□□ -1.54
SSX3Q99909 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SSX3Q99909 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SSX3Q99909 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX3Q99909 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX3Q99909 AC025470.1-201ENST00000510053 2032 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX3Q99909 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SSX3Q99909 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SSX3Q99909 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
SSX3Q99909 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX3Q99909 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.41□□□□□ -1.54
SSX3Q99909 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SSX3Q99909 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms