Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 CUBNP2-201ENST00000443534 1139 ntBASIC8.65□□□□□ -1.02
SIN3AQ96ST3 RPL38P3-201ENST00000484463 213 ntBASIC8.65□□□□□ -1.02
SIN3AQ96ST3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 AC007956.1-201ENST00000555623 542 ntBASIC8.65□□□□□ -1.02
SIN3AQ96ST3 AC006530.1-201ENST00000555980 571 ntBASIC8.65□□□□□ -1.02
SIN3AQ96ST3 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 RPL12P48-201ENST00000605620 304 ntBASIC8.65□□□□□ -1.02
SIN3AQ96ST3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
SIN3AQ96ST3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
SIN3AQ96ST3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.03
SIN3AQ96ST3 AC005225.5-201ENST00000623547 2225 ntBASIC8.65□□□□□ -1.03
SIN3AQ96ST3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8.65□□□□□ -1.03
SIN3AQ96ST3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SIN3AQ96ST3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SIN3AQ96ST3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AC130304.1-201ENST00000622942 2385 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 RNU1-150P-201ENST00000362491 162 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 RNA5SP500-201ENST00000364486 119 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 RAB5CP1-201ENST00000395972 580 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AKR1B10P1-201ENST00000425765 942 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 GAPDHP48-201ENST00000436626 961 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 PCBP2P1-201ENST00000437262 977 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AL359839.1-201ENST00000451975 1160 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AL157777.1-201ENST00000468100 304 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 NDUFA5P5-201ENST00000468361 342 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AC023245.1-201ENST00000468501 517 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 TOMM22P4-201ENST00000511318 336 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AC012254.3-201ENST00000591183 2117 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 FO681491.1-202ENST00000623392 737 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 AC091305.2-201ENST00000624049 1576 ntBASIC8.64□□□□□ -1.03
SIN3AQ96ST3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC8.64□□□□□ -1.03
SIN3AQ96ST3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 OR56A4-201ENST00000330728 1209 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 RNA5SP211-201ENST00000365516 117 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 AL451142.1-201ENST00000375867 775 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 RPL5P10-201ENST00000445207 894 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 CFL1P4-201ENST00000451536 498 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 AC083795.1-201ENST00000491760 320 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 PFN1P8-201ENST00000497012 543 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 PRMT5P1-201ENST00000514351 598 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 CASC19-238ENST00000641523 1558 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms