Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PTCHD1Q96NR3 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PTCHD1Q96NR3 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PTCHD1Q96NR3 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PTCHD1Q96NR3 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PTCHD1Q96NR3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PTCHD1Q96NR3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PTCHD1Q96NR3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 TRIM53CP-201ENST00000531490 1354 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 Y_RNA.77-201ENST00000362962 107 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 RN7SKP257-201ENST00000364525 309 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 SNORA70.5-201ENST00000365519 135 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC074375.1-201ENST00000372993 192 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 MIR152-201ENST00000385212 87 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC019178.1-201ENST00000392337 440 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 RPS3AP26-201ENST00000398259 784 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 NUDT19P3-201ENST00000404698 555 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AL139135.1-201ENST00000412675 209 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AL662791.3-201ENST00000413771 776 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 GTF2IP2-201ENST00000424290 697 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC234781.2-201ENST00000426370 994 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 OR52S1P-201ENST00000427016 937 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 MTCO2P16-201ENST00000436962 677 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 MTND5P2-201ENST00000442927 1142 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC009961.3-201ENST00000449832 765 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 OSTCP1-201ENST00000455507 450 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 RPLP0P1-201ENST00000457002 361 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 CST12P-201ENST00000457644 362 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 WBP1LP1-201ENST00000460451 896 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC025271.1-201ENST00000485045 429 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 RPL12P7-201ENST00000493832 494 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 Vault.2-201ENST00000516519 98 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 SCARNA18.2-201ENST00000516882 84 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 WDR45BP1-201ENST00000583470 1029 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC095055.1-201ENST00000603472 1113 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AP003392.5-201ENST00000607857 415 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AP005329.3-201ENST00000609924 686 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC104073.3-201ENST00000610942 955 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AL121782.1-201ENST00000611242 413 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC243725.1-201ENST00000637164 436 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 AC090771.1-201ENST00000585803 1618 ntBASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTCHD1Q96NR3 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.33
PTCHD1Q96NR3 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
PTCHD1Q96NR3 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PTCHD1Q96NR3 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PTCHD1Q96NR3 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PTCHD1Q96NR3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PTCHD1Q96NR3 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PTCHD1Q96NR3 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
PTCHD1Q96NR3 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 RNU6-932P-201ENST00000391108 106 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AL590084.1-201ENST00000407885 387 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms