Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC024940.4-201ENST00000605507 246 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 AC087269.2-201ENST00000641764 975 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 AL049634.1-201ENST00000453770 1720 ntBASIC7.31□□□□□ -1.24
SNED1Q8TER0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNED1Q8TER0 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SNED1Q8TER0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SNED1Q8TER0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SNED1Q8TER0 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SNED1Q8TER0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SNED1Q8TER0 AC008171.1-201ENST00000395058 200 ntBASIC7.3□□□□□ -1.24
SNED1Q8TER0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 AC011742.2-201ENST00000443818 352 ntBASIC7.3□□□□□ -1.24
SNED1Q8TER0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SNED1Q8TER0 GAPDHP71-201ENST00000511530 1003 ntBASIC7.3□□□□□ -1.24
SNED1Q8TER0 SNORA26.10-201ENST00000516427 141 ntBASIC7.3□□□□□ -1.24
SNED1Q8TER0 KCTD9P4-201ENST00000526766 1166 ntBASIC7.3□□□□□ -1.24
SNED1Q8TER0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 AL136295.6-201ENST00000610486 658 ntBASIC7.3□□□□□ -1.24
SNED1Q8TER0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 AC024255.1-201ENST00000614376 102 ntBASIC7.3□□□□□ -1.24
SNED1Q8TER0 AC087565.3-203ENST00000641018 837 ntBASIC7.3□□□□□ -1.24
SNED1Q8TER0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SNED1Q8TER0 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.3□□□□□ -1.24
SNED1Q8TER0 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.3□□□□□ -1.24
SNED1Q8TER0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SNED1Q8TER0 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 AC092692.1-201ENST00000623625 2595 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 RNU1-19P-201ENST00000363306 165 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 AC126120.1-201ENST00000431082 470 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 AL390119.1-201ENST00000440329 312 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 LRRC37A14P-201ENST00000452297 462 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 AC008629.2-201ENST00000503783 483 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 SNORA43.3-201ENST00000517240 103 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 OR7E158P-201ENST00000524483 910 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 AC010480.1-201ENST00000624823 684 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 AC025470.1-201ENST00000510053 2032 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 AC089998.1-201ENST00000548575 3141 ntBASIC7.29□□□□□ -1.24
SNED1Q8TER0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.29□□□□□ -1.24
SNED1Q8TER0 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SNED1Q8TER0 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNED1Q8TER0 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 RAD17P2-201ENST00000451754 1977 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNED1Q8TER0 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNED1Q8TER0 RNA5SP375-201ENST00000362975 119 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 RNA5SP478-201ENST00000364657 115 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNED1Q8TER0 RN7SKP29-201ENST00000410957 272 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 CNOT7P2-201ENST00000441051 832 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.28□□□□□ -1.24
SNED1Q8TER0 AC104164.1-201ENST00000460282 590 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 AC005532.2-201ENST00000467154 373 ntBASIC7.28□□□□□ -1.24
SNED1Q8TER0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms