Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 DNAJA1P5-201ENST00000440278 943 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC002553.3-201ENST00000453002 341 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 VPS25P1-201ENST00000455691 508 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC023194.2-201ENST00000465398 406 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 RPL12P24-201ENST00000474907 486 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 LDHAP1-201ENST00000509421 992 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC073916.1-201ENST00000545095 130 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC090826.1-203ENST00000569235 490 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC233702.7-202ENST00000582941 211 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AL359742.1-201ENST00000622497 540 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AL449283.1-201ENST00000602631 3403 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 VN1R3-201ENST00000418822 919 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC097721.1-201ENST00000427150 1253 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 RPL34P27-201ENST00000428810 349 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC023141.3-201ENST00000436698 278 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AP004609.2-201ENST00000532177 190 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 NANOGNBP2-201ENST00000544753 553 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC007346.1-201ENST00000569208 867 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 LINC00556-201ENST00000569603 412 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AL138895.2-201ENST00000603019 178 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC009237.12-201ENST00000604755 742 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC092681.3-201ENST00000609463 678 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC006924.1-201ENST00000610750 559 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AL445649.1-201ENST00000615941 691 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AC011504.1-201ENST00000623331 4103 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 GUCY1B2-204ENST00000531898 1979 ntBASIC5.75□□□□□ -1.49
H3F3CQ6NXT2 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.74□□□□□ -1.49
H3F3CQ6NXT2 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
H3F3CQ6NXT2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.74□□□□□ -1.49
H3F3CQ6NXT2 DOCK11P1-201ENST00000553480 5932 ntBASIC5.74□□□□□ -1.49
H3F3CQ6NXT2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
H3F3CQ6NXT2 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms